Gene Snas_6380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6380 
Symbol 
ID8887606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6731673 
End bp6732080 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003515089 
Protein GI291303811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.862709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAT TCACCGACGT CATCATCGAC TGTCCCGACC CGATGAGGCT GGCGGCGTTC 
TACGCCGAGC TGACCGGTCG CCCGGTCAAG GACGACAGCA CCGACCAGTG GGCCGGGATC
AAGTTCGGTG AGATCGAGCT GGCGTTCCAG CGGGTGGACG ACTACCGGCC GCCGAACTGG
CCCGACGACG AGCATCCCAA GCAGTTCCAC CTCGACTTCG AGGTGGACGA GATCGAACCC
GAGCAGCGCC GCGTCGTCGC GCTGGGGGCG AGGCTGCGGA AGGACTTCAT CGGGCCCGAG
GGGTTCGGCT GGCAGATCTA CACCGACCCG GTGGGGCATC CGTTCTGTCT GTGTCGCAAC
AAGGGTGTGA AGTGGCAGGA CGGCAAGGCG GTCTGGCCGC GGAAGTAG
 
Protein sequence
MLQFTDVIID CPDPMRLAAF YAELTGRPVK DDSTDQWAGI KFGEIELAFQ RVDDYRPPNW 
PDDEHPKQFH LDFEVDEIEP EQRRVVALGA RLRKDFIGPE GFGWQIYTDP VGHPFCLCRN
KGVKWQDGKA VWPRK