Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6369 |
Symbol | |
ID | 8887595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6717913 |
End bp | 6719853 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | N-acetylmuramyl-L-alanine amidase negative regulator of AmpC, AmpD |
Protein accession | YP_003515078 |
Protein GI | 291303800 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGCAA ACCTCATTCG AACGCGCTTG CCCAAGCGCG CCATCGCGGC CGCGGCCGTA CTGGCCGTCG GCACCACCGC GGCCATCACC TGGAGCACGG GGGCCAACGC CCAGGCCCCC GCCGACCGGC AGGGTGAGTT CGCCGCCGCG GCGGCCGAGT TCGGTGTGCC CGAGCCGGTC CTGCTCGGTG TGTCCTACAT GGAGTCGCGG TGGCGGGACC ACGGCGGCAC CTACAGCACC GCCGCCGGTT TCGGCCCGAT GCATCTCACC GACGCCAAGG CCGTGAAGGC CGAGGAGGGC GATGGCAGCC ACCACGACGG CGAGGACGCC CGCGGCGACG ACCGCCGTCC CATGGAGGCC CCCGAGGGCG GCTCGTCCGA GGCCCCGAAG GAGGCCGCGT ACGCGACGCT GCCCAAGGCC GCCGAACTGA CCGGCGCCTC CCGCGAGGCG CTGCGCACCG ACCCGCTGGC CAACATCCGC GGCGGTGCCG CGCTGTTGGC CGACCACCAG GACGCGCTGG GCATCGACAG TGACGACCCG GGCGACTGGT ACGCGGCGGT GGCGAAGTAC TCCGGTGCCG CCGACACGGC GACCGCGGGC CGGTTCGCCG ACGACGTCTT CGAACTGATC GCCTCGGGTG CCACCGAGAA GACCGACGAC GGCACCGTCA AGCTCAAGGC CGCCGCCGTG TCCCCGGACC GGGGCAGCCT GGAGAAGGCG GGCCTGCGCG ACAGCCGCAA GGGCAAGACC GAATGCCCCA AGAAGCTGAA GTGCGAATGG ATCCCGGCGC CGTACGAGAA GTACGGCGAG AAACCCGTCG ACTACGGCAA CCATGACCAG GCCAACCGGC CCAAGGACAT GGACATCGAC TACCTGGTCA TCCACGACAC CGAGACCAGT TACACCAACA CGTTGCGGCT GGTCCAGGAC CCGACCTACG TCAGCTGGCA GTACACGCTG CGGTCCTTCG ACGGGCACGT CGCCCAGCAC GTCAAAAGCG AGGACGTGGC CTGGCAGGCC GGTAACTGGT CGGTCAACGC GCATTCGATG GGTCTGGAGC ACGAGGGCGT CGCCGCCGAG GGTTCCTGGT TCACCGAGGC CATGTACCGC AGTTCGGCGA AGCTGGTGAA GTACCTGTCG AAGAAGTTCG ACATCCCGCT GAACCGCGAC CACATCATCG GCCACGACAA CGTTCCCGGC ACCGCCCCGG CCAAGATCGC GGGGATGCAC TGGGACACCG GCCCGTTCTG GGACTGGCAG CACTACTTCG ACCTGCTGGG TGCCCCGCTG GAGCCCGGCG ACGGTGACAA CGGCGTGGTC ATGGTCGCGC CCGACTTCGA CACCAACACT CCCGAGATGA TCGGCTGCGA CGTGTCGAAC CCGCAGGGCT CGTGCGGCAA GCGCGGTGCG GCGGTCGTCT TCCTGCGCAG CGAACCCCGC GCCGACGCGC CGCTGCTCAA CGACAAGGGC ATCAAGCCCG ACGGCACTCC GGCCACCAAC CGGGTCAACG ACGTCGGCAG CCGTGCCGGT ACCGGTCAGC GCTTCGTCGT GGCCGAGGAG AAGGGCGACT GGACGGCGGT GTGGTATCTG GGCCAGAAGG GCTGGATCCA CAACCCGAAG GACGCCCCGA CCCTGATTCC GGCCGACGGC AAGGCGATCA CGCCCAAGTC CGACGACGTG AAGGTGTACG GCGTGCCGTA CCCGGAGGCC GAGGCCTACG AGGGCACCGG TGTCCCGGTG CAGGACCTGC CGCCGCTGCC CTACACGATC GACAAGGGAC AGTCCTACAG CACGCCGGGC AAGGTCGACT CCGAGTACTA CTACGCCAAG GAGTTCGAGG TCCCCGGCAT CCTGGTCGAG GGCGACCGGT CCTACTACCA GATCCAGCTC GGCGGTCGGC TGATGTACGT CGACGCCGCC GACGTGAAGC TCGTACGGTA A
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Protein sequence | MSANLIRTRL PKRAIAAAAV LAVGTTAAIT WSTGANAQAP ADRQGEFAAA AAEFGVPEPV LLGVSYMESR WRDHGGTYST AAGFGPMHLT DAKAVKAEEG DGSHHDGEDA RGDDRRPMEA PEGGSSEAPK EAAYATLPKA AELTGASREA LRTDPLANIR GGAALLADHQ DALGIDSDDP GDWYAAVAKY SGAADTATAG RFADDVFELI ASGATEKTDD GTVKLKAAAV SPDRGSLEKA GLRDSRKGKT ECPKKLKCEW IPAPYEKYGE KPVDYGNHDQ ANRPKDMDID YLVIHDTETS YTNTLRLVQD PTYVSWQYTL RSFDGHVAQH VKSEDVAWQA GNWSVNAHSM GLEHEGVAAE GSWFTEAMYR SSAKLVKYLS KKFDIPLNRD HIIGHDNVPG TAPAKIAGMH WDTGPFWDWQ HYFDLLGAPL EPGDGDNGVV MVAPDFDTNT PEMIGCDVSN PQGSCGKRGA AVVFLRSEPR ADAPLLNDKG IKPDGTPATN RVNDVGSRAG TGQRFVVAEE KGDWTAVWYL GQKGWIHNPK DAPTLIPADG KAITPKSDDV KVYGVPYPEA EAYEGTGVPV QDLPPLPYTI DKGQSYSTPG KVDSEYYYAK EFEVPGILVE GDRSYYQIQL GGRLMYVDAA DVKLVR
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