Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6359 |
Symbol | |
ID | 8887583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6707376 |
End bp | 6709190 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003515068 |
Protein GI | 291303790 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.717517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGCGG AACTGGTGGA GGAACGGCCG CCTACCGTCA CCGGCGCGGC GAAGGAACCC GAGAAGAAAC CCCGGCGACA GCGGCTGAGC CGCCTGGCCA CCACACCCCG GCTCATCGCG GCCGGATACC TGCTGACCTC GTTCCTGCTC ATGATCGGCC TGTGGGTCAA CCCGATCGGA CGGCATCACG CCGACAACCC GGGTGACGAC CAGGTCCTGT TCGAGTGGGT GCTGGGGCAC ACCGCCCGTG CCATCACCCA CGGCGAGAAC CCGCTGTTCA GCCAGCTGCT GAACGTGCCC GACGGCGTCA ACCTCATGGC CAACACCTCG GTGGTGGCCA TCGGGTTGGT GCTCGCACCG ATCACGCTGC TGTTCGGGGC GCCGGTGACC TACGTGCTGG CGATGACGCT GGGCCTGTTC GGCACCGCGC TGGCCTGGTG CCACTTCTTC AAGCGCTACC TGAAACTGAC GACCGCGGCC TCCGTGGTGG CGGCCGGGCT GTGCGCCTTC GGGCCCTCCA GCGTCGCGCA CGCCAACGGG CACCTCAACT TCACCGCGAC GTTCATGGTG CCGATCATCC TCATCGCGAT CCTGCGGCTG CGCGAGCCGG GCAACCTGCT GCGCAAGAGC GTGTGGCTGG GCCTGCTGCT GGTGGTGCAG ATCTTCATCG GCGAGGAGGT CGTGTTCCTG CTGGCGCTGT TCATGGCCGT GTTCACCGCC GTGTACGCGA TCACCGAATG GCACGTCGTC AAGCCGCTGA TCCCGCGCTA CCTCAAGGGT TTGACCATCG CGGGCCTGGT CTCGCTGGCG CTGTTGGCCT ATCCGCTGTG GCTGCAGTTC CTGGGACCGC AGTCCTACAG CGGCATCCCG TGGCCGCCGG AGGACTTCCC GGCCGACCTG GCCTCGTTCG CGGCCTTCCC CAGCGACTCG CTGGGCGGAC GGGTGCAGCT GCCCAACGTC CGGCTGCGGC ACAACGTCAC CGAGGAGAAC ACCTTCTTCG GGCTGCCGCT GGCGGCGCTG ACGATCGTGC TGGGTCTGAT GTTCTTCAAG CGGCACAAGG TGCTGCGCAG CCTGAGCATC ACCGCGATCG TGTTCGCCGC GCTGAGCCTG GGCAGCCAGA TCCGCGTCAA CGGCAACCAC ACCGGCGTGT GGGGACCGTA CGCGCTGGTG CGGCCGCTGC CGCTGTTCGA CTCCACCATC CCGACCCGGT TCGCGCTGGT GATCCTGCCG GTGGTCGCGA TCTTCGTCGC CTACGGGCTC GACCGGGCCT CCCGCAAGGC CCGGGAACTG CGCCGCACCT GGTACCTGGT CTTCGCGGTG GCGCTGGTGC CGCTGATCCC GCTGGCGCCG TCCACCGAAC CGCGCACCCC GATCCCCGAG TTCATCACCT CCGGGGAATG GCGGGACTAT GTGGACGAAG GCGGGACGAT GGTCCCGGTG CCGATCTCGG AGCACATCTC CTTCGACGGG CAGCGCTGGC AGGAGGCCGC CGACTTCGAG TTCGCGGTGC CGCTGGGCGC GTTCATCGGT CCCGACTCCA CCGGCGACGG CCAGTGGAGC GGCAAGCACC TGCCCACCGC CAAACGGATC CTCAAGACGA TGGACGACGG CTCGATCGGC AACGTGACCG ACGCCGACCG GGAACAGGCC GCCGAGGACC TGCGGGTCTG GCGGGCCGAG GCCGTCGTGC TGGGACCCGA GCACAAGTAC CAGCGGCAGC TGCGGACCCT GCTGACCCGA CTGTGGGGCC CGGGGACCAA GGTCGCCGAT GTTCTGGTCT GGAAGGTGGA TCCCAAGACC GGCGAGGTCG GCTAG
|
Protein sequence | MTAELVEERP PTVTGAAKEP EKKPRRQRLS RLATTPRLIA AGYLLTSFLL MIGLWVNPIG RHHADNPGDD QVLFEWVLGH TARAITHGEN PLFSQLLNVP DGVNLMANTS VVAIGLVLAP ITLLFGAPVT YVLAMTLGLF GTALAWCHFF KRYLKLTTAA SVVAAGLCAF GPSSVAHANG HLNFTATFMV PIILIAILRL REPGNLLRKS VWLGLLLVVQ IFIGEEVVFL LALFMAVFTA VYAITEWHVV KPLIPRYLKG LTIAGLVSLA LLAYPLWLQF LGPQSYSGIP WPPEDFPADL ASFAAFPSDS LGGRVQLPNV RLRHNVTEEN TFFGLPLAAL TIVLGLMFFK RHKVLRSLSI TAIVFAALSL GSQIRVNGNH TGVWGPYALV RPLPLFDSTI PTRFALVILP VVAIFVAYGL DRASRKAREL RRTWYLVFAV ALVPLIPLAP STEPRTPIPE FITSGEWRDY VDEGGTMVPV PISEHISFDG QRWQEAADFE FAVPLGAFIG PDSTGDGQWS GKHLPTAKRI LKTMDDGSIG NVTDADREQA AEDLRVWRAE AVVLGPEHKY QRQLRTLLTR LWGPGTKVAD VLVWKVDPKT GEVG
|
| |