Gene Snas_6210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6210 
Symbol 
ID8887432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6562307 
End bp6563215 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content72% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003514925 
Protein GI291303647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.115608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.43177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGACG TCGTCGTCGC CCTCGATGTC GGCGGCACCT CCATGAAATG CGCCCTGGTC 
GACGTCAACG GCCGGGTCCT GCACAGCGAA ACCCGCGTCA CGCCACGGGA ACACGGCCCC
GAGGCCGTCA TCAAATCCAT AGTAGACACC GCGGTCGAGC TGGCCGCCAC CCCCGGCTAC
CGGGCCCGCG CCGTCGGGCT CGTCGTGCCC GGCCCGGTCG ACAACGAGCG CGGCATCGCC
GTGTACTCCT CCAATCTCGG CTGGCGCGAC GTCCCGTTCC GGCAGCTGGT GGAGGCCGAA
CTGGGGCTGC CGACCGCGTT GGGTCACGAC GTGCGCGCCG GTGGCCTGGC CGAGGCCCGG
CTGGGTGCTG GACGCGGCAG CCGCCAGCTG CTGTTCGTCG CCATCGGCAC CGGCATCGCC
GGGGCCCACA TCATCGACGG TTCCGGCCTG TCGGGCGCGC ACGGCGCCGC CTGCGAACTG
GGCCACGTGG TGGTGCGTCC CGACGGCCCC AAGTGCGGCT GCGGCCAGTA CGGCTGCGTG
GAGTCGCTGG CCAGCGCCGT GCAGTTCGAG CGCCGCTACG CCGAGGCGTC CGGCACCGCG
CGTGAGGCGA TGGACATCAT CGCCGCCGTC GACACCGACC CGATCGCGCA ACGGGTGTGG
CGCGAGACGA TAGAGGTGCT GGCCGACGGT TTCCTGCTGG GCATCGCGCT GTTGGACCCC
GACACGATCG TCGTCGGCGG CGGGCTGGCC AAATCCGGCG ACGCGCTGCT GACGCCGCTG
CGCACGGCCT TGACGGCTCG CGCTACTTTT CACACCGTGC CAAGGCTGGT CGCGGCCGAA
CTCGGTCGCG AGGCAGGATG CGTTGGCGCG GCACTGCTGG GACTGGAACG ACTGGAGGAC
GGCACGTGA
 
Protein sequence
MSDVVVALDV GGTSMKCALV DVNGRVLHSE TRVTPREHGP EAVIKSIVDT AVELAATPGY 
RARAVGLVVP GPVDNERGIA VYSSNLGWRD VPFRQLVEAE LGLPTALGHD VRAGGLAEAR
LGAGRGSRQL LFVAIGTGIA GAHIIDGSGL SGAHGAACEL GHVVVRPDGP KCGCGQYGCV
ESLASAVQFE RRYAEASGTA REAMDIIAAV DTDPIAQRVW RETIEVLADG FLLGIALLDP
DTIVVGGGLA KSGDALLTPL RTALTARATF HTVPRLVAAE LGREAGCVGA ALLGLERLED
GT