Gene Snas_6128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6128 
Symbol 
ID8887349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6487789 
End bp6488706 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative lipoprotein 
Protein accessionYP_003514845 
Protein GI291303567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.413679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACT ATTTCGGGCA AAACGGGTAC TCAGTCCGGT TCGGTTGGGG GCCAATGGAA 
GCCATGGAGC TGGCTTCGGA GGGTGCCTGC GTGGTGGTCG TGGACGTGTT GTCGTTCACG
ACGGCGGTCA CCGTCGCCGT CGAGCACGGC AGCGCGGTGT TCCCGTATCC GTGGCGGGAC
GAGTCGGCGC GGGGGTTCGC GGCCCAGCAC GACGCCGAGC TCGCGGTGGG GCGGCGCATG
GTCGACACGG ACAACCCCTG GTCGCTGTCG CCAGCGGCGC TGTTGGCCGC GCCGAAGGTC
GCGCGGCTGG TGTTGCCGTC GCCGAACGGT TCCTCGATCG CGGCCTCGGT GCGGCAGGGG
ACCGTGGTGG CCGGTTGCCT GCGAAACGCC ACCGCCGTCG GGAAGTGGAT CGGCGGCAAC
GGTTACGGAC AGCCCGGCAG GCCGGTGGTG GTGATCGCCG CGGGTGAGAA GTGGGGCGAC
GGGTCGCTGC GGCCGTGCCT GGAGGATCTG CTGGGTGCCG GGGCGGTGCT GGCGGCGCTG
CCGGTCGACG ACGCGCACTG GTCGCCGGAG GCCCGCGCGG CGCGCGCCGC CTTCGCGGGT
TCGACCGACG TGGTGCGGGC GGTTCGCGAC TGCGGCAGCG GTGTCGAGCT GTCGCGCCAG
GGGTTCGCGT CCGACGTGGA CGTGGCGGTC GAGCTCGCGG CCTCGACCGT CGTGCCTGTG
CTGACGGACG GGGCGTTTCG CGCCGAGCGG CCGTTACGGC CCCGGCGGCG AGCTGGACAG
CGGTGTGGTG CTGGACGAGG GGCGTTACGG TCCTGGCGAC GCGCGCCGCG GCGCGATCAC
GGCGTGGTTC TGGACGACGG GCCGCCGAGC GGCCGTTACG GCTCGGACAG CGGAACGGCG
GTGTGGTGCT CGACGTGA
 
Protein sequence
MSDYFGQNGY SVRFGWGPME AMELASEGAC VVVVDVLSFT TAVTVAVEHG SAVFPYPWRD 
ESARGFAAQH DAELAVGRRM VDTDNPWSLS PAALLAAPKV ARLVLPSPNG SSIAASVRQG
TVVAGCLRNA TAVGKWIGGN GYGQPGRPVV VIAAGEKWGD GSLRPCLEDL LGAGAVLAAL
PVDDAHWSPE ARAARAAFAG STDVVRAVRD CGSGVELSRQ GFASDVDVAV ELAASTVVPV
LTDGAFRAER PLRPRRRAGQ RCGAGRGALR SWRRAPRRDH GVVLDDGPPS GRYGSDSGTA
VWCST