Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6040 |
Symbol | |
ID | 8887261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6395424 |
End bp | 6396044 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_003514757 |
Protein GI | 291303479 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTGTCC ATATTGTCGC GGGGTTTCTG CTGGCCGTGT TTCCGTTGAT CGCCACGCCG GGGGCGAGTT TCACGTTGAT GACGCAGCGG GTGATTCCGC ACGGGGCCCG GCATGGGGTG CCGGTCATCC TGGGCACGAT CGCCGGGTTG TACGTGCACG CGACGTTGGC GGCGGTGGGG TTGTCCGCGT TGGTGATGCG GTCGGCGGAG TTGTTCGCCG TCGTCAAGGT CGTCGGCGCG GTGTACCTGG TCGGGCTGGG GTTGTGGACG TGGCGGACGA GTTTCGGCAC ATCCGAGGCG GCGACGACGC GGACGGGGGC GGCGAGTGGG TCGACGTTCG TGCAGGCGCT GCTGGGCAAC GTGCTCAATC CGAAGGCGGC GTCGATCTTC CTGACGCTGG TGCCGCAGTT CCTGGACTCG ACCCGGCCGA TCGTGCCGCA GATCCTGATC CTCGTGACGG CGCAGTCGCT GCTGATCACC GTGTGGCTGT TCGGCTGGGC CGCTGTCATC GGCCGGGCCG GACGCGCGTT TCGGTCTTCC GCGTTCACCA CCGTGTTCCG GCGGATCACC GGGACGGTGC TGATAGGACT CGGGGTGCGG GCCGCGTTCG GGTCCCGGTG A
|
Protein sequence | MSVHIVAGFL LAVFPLIATP GASFTLMTQR VIPHGARHGV PVILGTIAGL YVHATLAAVG LSALVMRSAE LFAVVKVVGA VYLVGLGLWT WRTSFGTSEA ATTRTGAASG STFVQALLGN VLNPKAASIF LTLVPQFLDS TRPIVPQILI LVTAQSLLIT VWLFGWAAVI GRAGRAFRSS AFTTVFRRIT GTVLIGLGVR AAFGSR
|
| |