Gene Snas_6021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6021 
Symbol 
ID8887242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6373628 
End bp6374860 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content72% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003514739 
Protein GI291303461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.99517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.959126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTAC GCGTACTACC CCCTGCCGGT GCCCCGCGCA CCCTGGCGCT CGCCCAGCTG 
GCCAACGCCA TCGGCGACGG CGTCTTCATC GTCACCTCCG CCCTGTACTT CTCCCGGATC
GTCGGCCTGC CCGCCGGACA GATCGGCCTG GGCCTGACCG TGGGTTGGGG CCTGGGCGCG
CTGGCCGGGG TGCCGTTGGG GCACCTGGCC GACCGCCGGG GCCCGCGCGG TGTCGCCGCC
GCCCTGGCCG TGGCCACCGC CGCCTCGGTG GCGGGCCTGC TGCTGGTGCG GGACTTCGTG
CCGTTCCTGG TGGTGGTGTG CTTCTACACC TGTAGCCAGT GCGGGCTGTT GGCGGCGCGG
CAGGCGCTGT TGGCCGGACT GGTGGACGCC ACCGAACGCA CCAAGGTGCG CGCGTATCTC
CAGTCGACGG TGAACGCGGG ACTGGCGATC GGGGCCGGTT TCGGCGGCCT GGCGCTGTAC
TTCGACACCG AGGCGGCCTA CCTGACCGTG CTGGGTCTGG ACGCCGCCGG TTTCGCGGTG
TCGGCGCTGG TGCTGTCGCG GTTGCCGAAG CTGCCACCGG CACCGCCGCG CGCCTCGGGG
GAGCCGATGC TCGCCGTCCT GCGCGACCGT CCCTACGCGG TGCTGACCTT CCTCAACGGC
GTCCTGCTGC TGTACATGCC GCTGCTGAGC CTCGTCGTCC CACTGTGGAT CGTGGCGCAC
ACCGCCGCGC CCCGCTGGCT GGTCGCGGCC ACACTGGTGC TCAACACCGC CTCGGTGATG
CTGTTCCAGG TGCGGGTGGC CCGTGGTGTC ACCGGCCCCG ACAGCGCCAG CCGCTACGTG
CGGCTGGCGG GCCTCATCAT GGCGGCGTCC TGCGCCGCCT TCGCGTTGTC CACACTGGGC
AAATCACCGT GGCTGGCCGC GCTGGTGCTG CTGGTGGCGG CCGGATTGCA GGTGTGGGGC
GAGATGACGC AGGCCTCGGG CATGTGGGAG ATCAGCTTCG CGCTGGCGCC GTCCGACAAA
CACGGCCAGT ACCAGGGTTT CTTCGGCTCC AGCACCACGA TGGCCCGGAT GCTGGGCCCG
GTGGCGCTGA CGATGCTGAT CGTGGACTGG GGCTGGCCCG GCTGGCTGGT CCTGGGCGGA
GTGTTCGTCG CCGCCGGGGT CGCGGTCGGC CCGGTGACGC GGTGGGCGCA ACGCACCCGT
CCGGCGGCCG AACCCGAGCG GGCACTTGGC TGA
 
Protein sequence
MPLRVLPPAG APRTLALAQL ANAIGDGVFI VTSALYFSRI VGLPAGQIGL GLTVGWGLGA 
LAGVPLGHLA DRRGPRGVAA ALAVATAASV AGLLLVRDFV PFLVVVCFYT CSQCGLLAAR
QALLAGLVDA TERTKVRAYL QSTVNAGLAI GAGFGGLALY FDTEAAYLTV LGLDAAGFAV
SALVLSRLPK LPPAPPRASG EPMLAVLRDR PYAVLTFLNG VLLLYMPLLS LVVPLWIVAH
TAAPRWLVAA TLVLNTASVM LFQVRVARGV TGPDSASRYV RLAGLIMAAS CAAFALSTLG
KSPWLAALVL LVAAGLQVWG EMTQASGMWE ISFALAPSDK HGQYQGFFGS STTMARMLGP
VALTMLIVDW GWPGWLVLGG VFVAAGVAVG PVTRWAQRTR PAAEPERALG