Gene Snas_5964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5964 
Symbol 
ID8887185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6323182 
End bp6323613 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID 
Product50S ribosomal protein L11 
Protein accessionYP_003514684 
Protein GI291303406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.666277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCGA AGAAGAAGCT CTCGGTGGTT TTCAAGCTGG AGCTGACCGC AGGACAGGCC 
ACCCCGGCAC CGCCGGTCGG CCCCGCGCTC GGTCAGCACG GCGTGAACAT CATGGAGTTC
TGCAAGGCGT ACAACGCCGC GACCGAAGGC CAGCGCGGCG AGATCGTGCC GGCCGAGATC
AGCGTCTACG AGGACCGCTC CTTCACCTTC GTCCTCAAGA CCCCGCCGGC GGCGAAGCTG
CTGCTCAAGG CCGCGGGTGT CGACAAGGGC TCGGGTGAAC CGCACCGGCT CAAGGTCGGC
AAGGTCACCG CGGCGCAGGT CCGTGAGATC TCCGAGAAGA AGATGCCCGA CCTCAACGCC
AACGACCTGG ACGCGGCCGA CAAGATCATC GCCGGTACCG CCCGGTCCAT GGGCATCACG
GTCGAGGCCT AA
 
Protein sequence
MAPKKKLSVV FKLELTAGQA TPAPPVGPAL GQHGVNIMEF CKAYNAATEG QRGEIVPAEI 
SVYEDRSFTF VLKTPPAAKL LLKAAGVDKG SGEPHRLKVG KVTAAQVREI SEKKMPDLNA
NDLDAADKII AGTARSMGIT VEA