Gene Snas_5958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5958 
Symbol 
ID8887179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6319152 
End bp6319868 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514678 
Protein GI291303400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.24363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGC CAACCGTCAC CGAAACCCCC ACGGCCCCAG CCACAGCGAA AGTTCCATGG 
TGGAGACGTC CCTGGATCGT GCCACTGTGG GCGATCAGTG CCCTCTTCCT CGTCTGGCGG
GTGCCCGACT ACGTCGGCTA CAAGGATCCG GGCGCCCTGG TCGAGATGAG CGACTACCAG
CACTTCCTGA TCGTGTCCGG CCACATCATG CTGGGCGGCG TCTCGCTGAT CTGCTGCTGC
ATGCAGCTGT GGCCGTGGCT GCGCACCAAC CACCCCAAGG TGCACCGCGT CACCGGACGC
GTCTACGTCC TGGTGGTGCT GCCCGCCAGC GTGCTGGCGT TCTTCACCAG CTTCATGTCG
ATCACCACCC CGCCCTCGGG CCAGGTCGGC AACGGCATAC TGGCGACGCT GTGGCTGCTC
ACGACGCTCA TCGGCTTCCG GCACGTCCGC AACGGCCGCT ACGCCGACCA CCGGCGCTGG
ATGATCCGCA GCTTCGCGCT GTGCTTCTCG ATCGTGGTCA ACCGGTTGTT CATCGGCGTC
TACGCCGTCG GCTTCTCGCC GCTGCTGGAC AGCTTCTACG GCGGCAGCGT CGACAGGCTC
GCCACCGACG CGGCGGTCGC GTCCATCTGG TCCAGCTGGG TGGCCACACT GGTCTTCGCC
GAGTGGTGGA TGACCAGGCG CAGGAAACCC CGCAAGCGTG TCGCCACGGC CGCATAA
 
Protein sequence
MDQPTVTETP TAPATAKVPW WRRPWIVPLW AISALFLVWR VPDYVGYKDP GALVEMSDYQ 
HFLIVSGHIM LGGVSLICCC MQLWPWLRTN HPKVHRVTGR VYVLVVLPAS VLAFFTSFMS
ITTPPSGQVG NGILATLWLL TTLIGFRHVR NGRYADHRRW MIRSFALCFS IVVNRLFIGV
YAVGFSPLLD SFYGGSVDRL ATDAAVASIW SSWVATLVFA EWWMTRRRKP RKRVATAA