Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5958 |
Symbol | |
ID | 8887179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6319152 |
End bp | 6319868 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003514678 |
Protein GI | 291303400 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.24363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGC CAACCGTCAC CGAAACCCCC ACGGCCCCAG CCACAGCGAA AGTTCCATGG TGGAGACGTC CCTGGATCGT GCCACTGTGG GCGATCAGTG CCCTCTTCCT CGTCTGGCGG GTGCCCGACT ACGTCGGCTA CAAGGATCCG GGCGCCCTGG TCGAGATGAG CGACTACCAG CACTTCCTGA TCGTGTCCGG CCACATCATG CTGGGCGGCG TCTCGCTGAT CTGCTGCTGC ATGCAGCTGT GGCCGTGGCT GCGCACCAAC CACCCCAAGG TGCACCGCGT CACCGGACGC GTCTACGTCC TGGTGGTGCT GCCCGCCAGC GTGCTGGCGT TCTTCACCAG CTTCATGTCG ATCACCACCC CGCCCTCGGG CCAGGTCGGC AACGGCATAC TGGCGACGCT GTGGCTGCTC ACGACGCTCA TCGGCTTCCG GCACGTCCGC AACGGCCGCT ACGCCGACCA CCGGCGCTGG ATGATCCGCA GCTTCGCGCT GTGCTTCTCG ATCGTGGTCA ACCGGTTGTT CATCGGCGTC TACGCCGTCG GCTTCTCGCC GCTGCTGGAC AGCTTCTACG GCGGCAGCGT CGACAGGCTC GCCACCGACG CGGCGGTCGC GTCCATCTGG TCCAGCTGGG TGGCCACACT GGTCTTCGCC GAGTGGTGGA TGACCAGGCG CAGGAAACCC CGCAAGCGTG TCGCCACGGC CGCATAA
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Protein sequence | MDQPTVTETP TAPATAKVPW WRRPWIVPLW AISALFLVWR VPDYVGYKDP GALVEMSDYQ HFLIVSGHIM LGGVSLICCC MQLWPWLRTN HPKVHRVTGR VYVLVVLPAS VLAFFTSFMS ITTPPSGQVG NGILATLWLL TTLIGFRHVR NGRYADHRRW MIRSFALCFS IVVNRLFIGV YAVGFSPLLD SFYGGSVDRL ATDAAVASIW SSWVATLVFA EWWMTRRRKP RKRVATAA
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