| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5957 |
|---|
| Symbol | |
|---|
| ID | 8887178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6318307 |
|---|
| End bp | 6318996 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003514677 |
|---|
| Protein GI | 291303399 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.769485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACCG ACATCGACAC TCTGCTGTGG CAAGGCCAGA CCCGCCCCAA CCGCGGCCCC
AAGCCCAGTC TCAGCCTCGA CCGCATCGTC ACCGCGGCCG TCGCGATCGC CGACGCCGAG
GGCCTGGAGG GCCTGTCGAT GAAGAGCCTG GCCACCAGGC TCAACAGCGG CGTGATGTCC
ATCTACCGCT ACGTCCCCGG CAAGGAGGAG CTGATCGCGC TGATGATCGA CGCCGCCGTC
GGCGAACCTC CGCGAGTCCC CGACGGCACC GGCTGGCGTG AGGGCATTCG CCTGTGCGCC
AGGGCCATCC GGGGTTTCTT CCTCGCCCAC CCCTGGGCGC TGCCGCTGGT CACCAAGGGA
CGGGCCATCG GCCCCAACGA GACCGGCTGG CTGGAGTCCC AGCTCACGGC ACTGTCCAGT
CTCGACGTGT CACCGGGCAC CCGGCTCAAC CTGGCCATGG CGGTGTCCAG TTACGTCCGG
GGCGCGGTGA CTCCCGAACT GTTCGGCGAG GACAACGGCG AGCTGCGGTT CGCGTTCCTG
GACCACCCCG ACAGCCACGC GCGCTTTCCG ATGCTGGCCC ACACGCTCAC GTCGATCGAT
CCCGGCACCG ACGAGGGTTT CGACAGTTTC TTCGAGTTCG GTTTGACACG GATGCTCGAC
GGCATCGCGG CACGGTTCGA CCGGGAATGA
|
|---|
| Protein sequence | MGTDIDTLLW QGQTRPNRGP KPSLSLDRIV TAAVAIADAE GLEGLSMKSL ATRLNSGVMS
IYRYVPGKEE LIALMIDAAV GEPPRVPDGT GWREGIRLCA RAIRGFFLAH PWALPLVTKG
RAIGPNETGW LESQLTALSS LDVSPGTRLN LAMAVSSYVR GAVTPELFGE DNGELRFAFL
DHPDSHARFP MLAHTLTSID PGTDEGFDSF FEFGLTRMLD GIAARFDRE
|
|---|
| |