| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5876 |
|---|
| Symbol | |
|---|
| ID | 8887092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6235963 |
|---|
| End bp | 6237177 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | vesicular transport-associated repeat protein |
|---|
| Protein accession | YP_003514597 |
|---|
| Protein GI | 291303319 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.547798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.93178 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGCT ATGACCGCGG TCAGGTCGAG ACCTACGCCC GCCGGATGTC CGCGGCGGTG
AAGAACGCCG AAGCCAGCCG CACCGAAGCC GAGACCAAGC TGTCGGAGGT GCGCACCTCG
TTGCGCCGCA CCGAGGACCG GCTGGGCAGC CTGGAGCGCC GGATGGCCGA CACCGCCGCC
CAGATCGCCG AGAACGAACA ACCCACCCTG GCCGGGCTCG GTGCCCGGGT CGAGAAAGAT
CTGCGCGCCT CCGAACGCGA CGCGGACGAA CAGCGCGAGG AGGCCCGTCG TCAGGCCCTC
GCCATCCGCG AGGACGCCAA GGCCGAGGCC GCCCGCACCT CCGAGGTGGC CCGCGCCGAG
GCCACCGCCG TGACCACCTC CGCCCGCCGC GAGGCCGAGG AGCTGGCCGC CGCGGCCCGC
ACCGAGTCCA CCGAGGTGCG CGAATCGGCC CGGCGCGACG TGGAACTGCT GCGTGCCGAC
ACCATCCGCG ACGTGGAACA GAAGCGCGCC AGCGCTTCGC AGGAGGCCGC CGAGCTCAAG
GCGAGCGCCG AACGCGAGAT CGCCGTCAAC CGCGCCACAG TGGACCGCGA GTCGACGCAG
CTGCGGGCCG CCGCCGCCCG GGACTCCGAC GAGCAGCGGG CCGCCGCGGC GACGCTGCTG
GCCGAGGCCG CCGAGACCCG GCAGTCCAAG TTGCAGGAAC TGTCGCTGGC CGAGGCGGAG
CGTCGCGAGC AGGCCGAACG CGAGCACTCC AAGCGGCACT CCGACGCGGT GACCCAGGCA
CAGCGCATCG TCGCCGAGGC CGAGCAGCGT TGGGCGCTGG CCGACCAGCG GGCCCGCGAG
ACCCGGCAGA AGGCCGAGGA CCGGGAGTCC GAGGCCGACC GCAAGTCCGA GGAACTGGCC
GCCCAGACCG AGGCGGCGGT GGCCCAGATC CTGTCCGAGG CCCGCGCCGA GGCCGACCGG
CTGCGCACCG AGGCCGAGAC CGCGGCCGAG GAGATGCTCA AGCCGCTGCG CGACGAGGTC
GCCGAGCTGA AGCGGCGCGA GTTGTCGGTG AGCTCGAACC TGGACGACCT GCGCCGCCAG
CTGGGCACGG TCGCGGGCGA GCAGGCCGCC GCGGTGCTCG ACAACCTGGC CGTGAACGCG
TCGCTGCCGA TCAACGCCCC GCGTTCCGGC TACGAGGTCG AGACGCCCAC CCAGCAGATC
CCGGCCATCA GCTAG
|
|---|
| Protein sequence | MRGYDRGQVE TYARRMSAAV KNAEASRTEA ETKLSEVRTS LRRTEDRLGS LERRMADTAA
QIAENEQPTL AGLGARVEKD LRASERDADE QREEARRQAL AIREDAKAEA ARTSEVARAE
ATAVTTSARR EAEELAAAAR TESTEVRESA RRDVELLRAD TIRDVEQKRA SASQEAAELK
ASAEREIAVN RATVDRESTQ LRAAAARDSD EQRAAAATLL AEAAETRQSK LQELSLAEAE
RREQAEREHS KRHSDAVTQA QRIVAEAEQR WALADQRARE TRQKAEDRES EADRKSEELA
AQTEAAVAQI LSEARAEADR LRTEAETAAE EMLKPLRDEV AELKRRELSV SSNLDDLRRQ
LGTVAGEQAA AVLDNLAVNA SLPINAPRSG YEVETPTQQI PAIS
|
|---|
| |