Gene Snas_5766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5766 
Symbol 
ID8886982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6127580 
End bp6128578 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content72% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003514489 
Protein GI291303211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCA CGACCGTCCT GGTCACCGGT GCCGACCGGT ATCTCGCCGG TCGATTGGTG 
GCGCGCCTGA CGGCCGACGA ACGGGTGAAA CGGGTCTTCG GCATCGACAC CGACTCCCTG
GACGGCAACG GTGACCTCAG CCGGATCCTG ACCGAAGAAC GTGTCGACAC CGTGGTGCAC
GCCGCCGTCG CCGCCTCGGC GGTGCGGGCC GGTGGTCGCA CCGCTCAGAA GGAATCCAAC
GTCCTGGGCA CGATGCACCT GCTGGCCGCG TGCCAGCGGG CCGAATCGGT GCGCCGGGTG
GTCGTCAAGT CCTCGGTCGC CGCCTACGGC GCGTCGGCCC GCGACCCGGC GGTATTCACG
GAGGACACCG AACTGCGGGC CGCGCCCCGG GGCGAGTTCG CCTCCGACGT CGCCGAGGTC
GAGGCGTACG CGCGTGGTTT CGCGCGCCGC CGCGAGAACG CCTCGGTGAC GGTGCTGCGG
CTGGCGCCGC TGCTGGGGCC CACCTCCGAC ACCTCACTGA CCCGGTACTT CTCGTTGCCG
GTGGTGCCGA CGGTGCTGGG CTACGACCCC CGGGTGCAGT TCCTGCACAT CGAGGACGCG
CTGGACGTGC TGCACAAGGT GACCCTGGAC GACCACCGCG CCCCCCGCGG CCGTCCCGAC
GTCTACAACG TGGCCGGTCC CGGCGCGCTG CTGCTGTCGC AGTCGATCCG GCGGGCCGGG
CGGGTCGCCG CGCCGACCCC GGAACTGCTG CTGCGCGGCT TCGCCGCCGT GGCGAAGGGC
CGTGGCCTGG TGGACTTCTC GCTGGACCAG CTGGACTTCC TGAAGTTCGG CCGCGTCGTC
GACTGCGGTC ACCTGACCCA GACGTACCGG ATCACCCCCC GGCCCACCAG CGAGGCCTTC
GACGACTTCG TCACCGGGCA CGCCCTGATG TCGGTGCTGG GCGGCGAGAG CATCACCGGT
GCGTCCGCCC GCGACAAGAG GAGCGACAGT GGACGCTGA
 
Protein sequence
MTPTTVLVTG ADRYLAGRLV ARLTADERVK RVFGIDTDSL DGNGDLSRIL TEERVDTVVH 
AAVAASAVRA GGRTAQKESN VLGTMHLLAA CQRAESVRRV VVKSSVAAYG ASARDPAVFT
EDTELRAAPR GEFASDVAEV EAYARGFARR RENASVTVLR LAPLLGPTSD TSLTRYFSLP
VVPTVLGYDP RVQFLHIEDA LDVLHKVTLD DHRAPRGRPD VYNVAGPGAL LLSQSIRRAG
RVAAPTPELL LRGFAAVAKG RGLVDFSLDQ LDFLKFGRVV DCGHLTQTYR ITPRPTSEAF
DDFVTGHALM SVLGGESITG ASARDKRSDS GR