Gene Snas_5672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5672 
Symbol 
ID8886887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6030988 
End bp6032769 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content70% 
IMG OID 
ProductUDP-N-acetylglucosamine--lysosomal-enzyme N-acetylglucosamine phosphotransferase 
Protein accessionYP_003514395 
Protein GI291303117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0990491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG CCTCTTCCGG CACGCCCCGT CCCTCGCCGA GCGTGGTGCG CGGAGCGCGT 
TCCGACAACG TGGTGAAGCG GCTGTACGAG CGGTCGCTGC CGGAGTCGGC GCGCGGGCTG
ATCCGTCGGC GGGTGCCCGT CGGCGCGCGG TTGTGGGTGC GGCGCCGGCT CGCCGACCTC
GGGGCGGCCG TCATGGGCGT GTTCCAGCTG GCCCGGCGCG CGGTCACGGG CTGGGCCCGG
TCGAACAATC CGGACGAGCG GATCGTGACC TTCGACGGTC GCAGCGTGGT CGCGGTGACC
ACCGCCGCCC TGGCGCCGCT GTCGGTGCAG CGCTCGACGC TGAAGCTCGT GTGCGACGCG
CTCGACGCGG TCGGGGCCGA GTACTTCCGG GTGCGGGGGA CGGCCCGGCT GGCCTCCCAG
ATCGGGGTCC CGGAGCCGCA GCGCCGCCTG GTCGCCGCCG CGATCGCGGG GCTGGCCCGT
TCGCACGCGA TCTACGTCGC CGACCCGGAA CAGCCGCAGC GGTTGCGGCG GCTGCGCGGA
TCCCGGCCGC TGTCACGGGA CCAGAACCTG CTGCGGCTGG TGCGGTTCCA CGCCGACGCC
TCCGGCGGCG TCGTCTTCGG TCCCGAACAC CACTGCGACA TCGAGCTGTG GCAACCCGAG
CCCGGCGACC AGCTGCGGGC GCCGCGCCCC AACCGGTGCG TCGAGTTCGT CGGCCGGAGC
GGGGAAACCG TCGAGGCCGG TGAGTCCACC TTCACCTCGC TGACCGGGCA CGGCGACGAG
TCCCAGCCCC GCTATCGGAC GCGGCCGGAG TTCCTGGGGC TGCTGCCCGA CGACCACACC
TTCCCGATCG ACGCGGTCTT CACCTGGGTC GACCAGGCCG ACCCGGAGTG GCAGGCCCGG
CGCGACGCGG CCATCGACGC CACCGACACG ACCGGGCTGC ACGGCCATTC GGCCAACAAC
GCCCGCTTCG TCAACCGCGA CGAACTGCGC TACGCGCTGC GTTCCCTCAA CACCTACGCG
CCGTGGATCA ACCACATCTG GATCGTCACC GACCAACAGC GTCCACAGTG GCTTGATGTT
CGACATCCGA AGCTGACCGT CGTCGACCAC AAGGACATCT TCGAGGACCC CAACGTCCTG
CCCACCTTCA ACTCGCACGC GATCGAGTCC CAGCTGCACC GCATCCCCGG ACTGTCGGAG
CACTTCCTGT ACTTCAACGA CGACATGATG CTGGGCCGCC CGATCGGACC GGACCAGTTC
TTCACCGCCG CGGGGGTCGC CAAGGTGTTC CCGTCGCCGC GCAAGCTGGG CGTCTCGCCG
GTCAGCCCCG AGGACGTCCC GGCCACCGCC GCGGGCAAGA ACACCCGCAC CCTGATCGAG
CGCCGGTTCG GCCGCACCAC CTCCGCCCAG TTCCTGCACT GCCCGTACGC GCTGAACCGG
GAGGTGCTGG CCGACATGTG GAGCGAGTTC GAACCCGAGC TGCGGGCCAC CGCCGCCCGG
CGGCTGCGGC ACCCGCGCGA CGTCTCGCCG ACCTCGTCGC TCTACCAGTA CTACGCGTAC
TTCCGGCACC GGGCGCTGTT GTCCCCCATC ACCACCAAGT ACGTCGACAT ATCGACCACA
CGGGCGTTCG AGCGTCTGCA GGATATTCTG GCCACTCGTG CGTACGCGAC CATCTGCGTC
AACGACACCC AGTCCCCGCC CGAGAAGGAA GCCGAGTATC TGCGCATCGT GACCCGATTC
CTGTCCGCGT ATTTTCCCCA GGCCGCACCA TGGGAAGTGT GA
 
Protein sequence
MTRASSGTPR PSPSVVRGAR SDNVVKRLYE RSLPESARGL IRRRVPVGAR LWVRRRLADL 
GAAVMGVFQL ARRAVTGWAR SNNPDERIVT FDGRSVVAVT TAALAPLSVQ RSTLKLVCDA
LDAVGAEYFR VRGTARLASQ IGVPEPQRRL VAAAIAGLAR SHAIYVADPE QPQRLRRLRG
SRPLSRDQNL LRLVRFHADA SGGVVFGPEH HCDIELWQPE PGDQLRAPRP NRCVEFVGRS
GETVEAGEST FTSLTGHGDE SQPRYRTRPE FLGLLPDDHT FPIDAVFTWV DQADPEWQAR
RDAAIDATDT TGLHGHSANN ARFVNRDELR YALRSLNTYA PWINHIWIVT DQQRPQWLDV
RHPKLTVVDH KDIFEDPNVL PTFNSHAIES QLHRIPGLSE HFLYFNDDMM LGRPIGPDQF
FTAAGVAKVF PSPRKLGVSP VSPEDVPATA AGKNTRTLIE RRFGRTTSAQ FLHCPYALNR
EVLADMWSEF EPELRATAAR RLRHPRDVSP TSSLYQYYAY FRHRALLSPI TTKYVDISTT
RAFERLQDIL ATRAYATICV NDTQSPPEKE AEYLRIVTRF LSAYFPQAAP WEV