Gene Snas_5649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5649 
Symbol 
ID8886864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6005711 
End bp6006511 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514372 
Protein GI291303094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.24363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0774344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC ACAGTGTTGA GAAACCCGCC TGCGGCGGCC TGGTCAGGTG GCTGGTCGCG 
CTCGCCGTGG TGGTCGTGCT GGCCGCGGTG GGGATCTTCT TCTGGAAGAA CGTCATCGGG
GGAGTCCCCC AGGAGGACGT GCAGTCCAAG GTCCACAGTA AACCGATCTC GCGACTGGTG
GTCGCCGGGG ACTCCGGTGA GGTCGACGTC GTCAAGGGGG ACAAGGTCCA CATTGAGGCC
ACACTGGAGT GGCAGGGCGA GCGCAAGCCC GTCAACTCGC AGAAGTGGGA CGGCGAAACC
CTGCGGGTGG AGGAGAAGGG GTGCCGGGGG GCCTGGGACT TCGTGGGCGA GTGCGGCATC
ACGTATCGGA TCGAAGTGCC CTCCGATGTG GATCTGGAAG TGCGGGTGGA CGCGGGGAAC
ATCACCACGT CCGGCATCAA GGGCGAGCAG AGACTGGAAA GCGACTCCGG CAACATCGAC
GTGTCCGACG CGGGGAAGGC CCTGACGGTC AAGGCCGACT CCGGCAACGT CACCGGCACC
GACCTGGCGG GCACGAAGGT CAACGTCACA CTGGACTCCG GGCAGATCGA CCTGGGTTTC
AGCAAGGCTC CCAGCCAGGT GAGGGCCGTC GCGGACTCCG GGTCGGTCAC GGTGCAACTG
CCCGAGGGCG ACGAGGGCTA CGACGTCCAC GCCGAGACCG ATTCGGGCAC CAGCGACGTG
GAGGTCTCCA CCGATTCGAC CTCGTCGCGG CGGATCAATG TCGAGACCGG CTCCGGGTCG
GTGACGGTCG AGTACGCGTG A
 
Protein sequence
MSEHSVEKPA CGGLVRWLVA LAVVVVLAAV GIFFWKNVIG GVPQEDVQSK VHSKPISRLV 
VAGDSGEVDV VKGDKVHIEA TLEWQGERKP VNSQKWDGET LRVEEKGCRG AWDFVGECGI
TYRIEVPSDV DLEVRVDAGN ITTSGIKGEQ RLESDSGNID VSDAGKALTV KADSGNVTGT
DLAGTKVNVT LDSGQIDLGF SKAPSQVRAV ADSGSVTVQL PEGDEGYDVH AETDSGTSDV
EVSTDSTSSR RINVETGSGS VTVEYA