| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5605 |
|---|
| Symbol | |
|---|
| ID | 8886820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5957248 |
|---|
| End bp | 5958045 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003514328 |
|---|
| Protein GI | 291303050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.254441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.608264 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGC TCGCGATCCG GCCGCGACGG CGGGTGCCGT GGGCGCGGCT GCTGGCCACC
CCGCTGAGTC TCGCGATCGG GGCATTGGCC TGGGAGATCG TCGGACAGGC CGCAAGCGTC
CGGTTCTTCC CGCCGTTGAG CGCGGTGCTG GCCCGGCTGG CCGAGATGGT CGGCAATGGA
CAGATCCTCG CCAATCTGGG CGACAGCCTC GTCAACCTGG TGCTGGGCTT CGGGATCTCG
CTGGTGGGCG GGCTGGTCAT CGGCGCCGCC ATGGGCCGCT ACCGCAAAGT GGAGGCGGCG
CTGGGCGTCT ACGTCTACGC GCTGCTCACC GCGCCGTCGC TGGTGTTCGC GCCGATCTTC
TTCTCGCTGC TGGGCGAGGG ACGGGCGTCC ATCGTCGCGG TGGTGGTGAC CTACGCGATG
TTCGTCATCG TCATCAACAC CGCCTCGGCG ATGCGCTCGG TGCCCGGCCA CCTGATCGAG
ATGGCCCGCT CCTACGGGGC CAGCGAATGG CAGATCCTCA CACGGATCAT GCTTCCGGCC
GCCACCCCGA TGATCATGGC CGGAGTCAGG CTCGGCGTCG GCCGGGCCGT CATCGGCATG
ATCAACGGCG AGATGTTCAT CGCCGTCGTC GGTCTGGGCC GGGTCGTCAC CCAGGCGGGC
GGACGCTTCG ACGGCGCCGG GGTGCTGGCG GTGCTGCTGG TCATCATCGC CGTCGCCCTG
GCCGCGGTCG GCCTGGTACA GGCCGTCGAC CGCCGCCTCA CCCGCTGGGT TCCCCAGACC
TCGAAAGGAA AGTCATGA
|
|---|
| Protein sequence | MSTLAIRPRR RVPWARLLAT PLSLAIGALA WEIVGQAASV RFFPPLSAVL ARLAEMVGNG
QILANLGDSL VNLVLGFGIS LVGGLVIGAA MGRYRKVEAA LGVYVYALLT APSLVFAPIF
FSLLGEGRAS IVAVVVTYAM FVIVINTASA MRSVPGHLIE MARSYGASEW QILTRIMLPA
ATPMIMAGVR LGVGRAVIGM INGEMFIAVV GLGRVVTQAG GRFDGAGVLA VLLVIIAVAL
AAVGLVQAVD RRLTRWVPQT SKGKS
|
|---|
| |