| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5603 |
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| Symbol | |
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| ID | 8886818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5954842 |
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| End bp | 5956023 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003514326 |
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| Protein GI | 291303048 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.442467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTC GAATCGCTTC TGCCACGGCC ATTGTGGCCG CGACACTGCT GTTGACGGGC
TGCGTGGAAA GCAGTACCGG AAACGATAAA GCGGAAGGCA ATCTCGTAGG CAAGGGCGAA
GGCGCGAAAT GCCAGATCGA GGATCCCGTC AAAGTGGGCG CTGTATTCAG TCTCACCGAG
GCGGCTGCCT TCGCCGGCAC ATACCAGAAA GAGGGCCTGG AACTGGCCTT CAAAGAACTG
AACAAAAAGG ATGGGGTCGA ATACGAACTC ATCCAGGAAG ACGACAAGAC GGACGTCAAG
GCGAGCCTCG CCGCTTTCGA GAAGCTCATC GACCGTGAGA AGGTAAGCGC GATCGTCGGC
CCCACACTGT CCAACTTGGC CTTCAAGACC TATCAGGACG CCGAGCAGGC GGGCGTCCCC
GCCCTCGGAG TGTCCACCAC CGCCGAAGGC ATCCCCGACA TCGGTGACTA CATCTTCCGG
AATTCGCTGC CCGAGCAGTA CGCCCTCGCC GCCAGCATCC CCGCGGCGAA GGACGCGCTC
GACCTCAAAA AGGTCGCCGT CCTCCACGAC GAGCAGGACG AATTCACCGC CTCGGCCTAC
AAGACCATGA AGGAAACCCT CAAAGAGGCG GAGATCGACA TCGTCGCCGA CGAGCAGTTC
CAGACCACCG ACACCGAATT CCGGTCGCAA CTGACCAACG TCAAGAGCGC CAAACCCGAC
GCGCTCGTCC TGTCCGCCCT GCCCGGTGCC ACCATCCCGC TGGTCAAACA GGCCCGCGAA
CTCGGCATCG ACGCACCCAT CGTGGGCGGA AACGCCTTCA ACTCGCCCGT GCTGATCAAG
CAGCTCGAGG ACGCCGCCGA GGGACTCATC GTCGGTGGCG CCTGGAGTGC CAAGACCGAG
ACCCCCGGCA ACGCCGAATT CATCAAGGCC TACAAGAAGG CCTACGACAA GGATCCCGAC
CAGTTCGCCG CCCAGGCGTA CACCGCCGGA TTCCTCATCG ATGAGGCCGT GCGCACCGAC
TGCGACGGCA ACCGGGACGC CATAAAGGAC AATCTCGGCC AGATCCTGAA GTTCGACACC
GTCCTGGGCA AGCTGTCCCT GGACGAGACC GGCGAGGTCC ACCAGGAACC GGTCGTCCAG
ATCGTCGAGG ACGGCAAGCT CACCCCGCTC AAGAAGAAAT AG
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| Protein sequence | MRIRIASATA IVAATLLLTG CVESSTGNDK AEGNLVGKGE GAKCQIEDPV KVGAVFSLTE
AAAFAGTYQK EGLELAFKEL NKKDGVEYEL IQEDDKTDVK ASLAAFEKLI DREKVSAIVG
PTLSNLAFKT YQDAEQAGVP ALGVSTTAEG IPDIGDYIFR NSLPEQYALA ASIPAAKDAL
DLKKVAVLHD EQDEFTASAY KTMKETLKEA EIDIVADEQF QTTDTEFRSQ LTNVKSAKPD
ALVLSALPGA TIPLVKQARE LGIDAPIVGG NAFNSPVLIK QLEDAAEGLI VGGAWSAKTE
TPGNAEFIKA YKKAYDKDPD QFAAQAYTAG FLIDEAVRTD CDGNRDAIKD NLGQILKFDT
VLGKLSLDET GEVHQEPVVQ IVEDGKLTPL KKK
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