Gene Snas_5600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5600 
Symbol 
ID8886815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5951476 
End bp5952183 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003514323 
Protein GI291303045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATG AACTGCTGCG AGTGGACGGT CTGCACGTCT CCTACGGACG GGTGCGGGCG 
GTGCGCGACG TGTCGTTCAC CGCCCCGCGC GGCGAGCTGA TCAGCCTGGT CGGCGCCAAC
GGCGCGGGCA AGTCCTCGGT GCTGGGCGCG GTCTCGGGAC TGGTGCGTCC GAAGTCCGGG
ACCGTCCACT ATGACGGCGC GAACATCACC CGCTGGCCCG CGCACCGGCG GGTCGCCGCC
GGAATGGTGC TGGTGCCCGA GGGCCGACAG ATCCTCACCA CCCTCACGGT CGCCGAGAAC
CTGCTGCTCG GCGGCTGGCG GCGACGCCGC GCCGCGGCCA CCATCGCCGA GATGTACGAG
CTGTTCCCGG TGCTGGCGCA GCGCCGCGAC CTGTCGGCGG GGACGCTTTC CGGTGGGGAG
CAACAGATGC TGGCCATCGC CCGCGCGATG GTCGCGCAGC CGCGGGTGCT GCTCATGGAC
GAACCGTCCA TGGGGCTGTC GCCCAAACTC GTCGACGAGG TGTTCCGGGT GATCGAGACG
ATCCGGGCCA CCGGAGTGAC CATTGTGCTC GTCGAGCAGA ACGCCCGGCG GGCGCTGCGC
GCCGCGGATA CCGGATATGT CCTGGAAACC GGGGTCGTCT CGCATTCGGG ACCGGCACCC
CGGTTGCTAG CCGATCGGCG GGTAGTTGAC GCCTATTTGG GGGGTTGA
 
Protein sequence
MSDELLRVDG LHVSYGRVRA VRDVSFTAPR GELISLVGAN GAGKSSVLGA VSGLVRPKSG 
TVHYDGANIT RWPAHRRVAA GMVLVPEGRQ ILTTLTVAEN LLLGGWRRRR AAATIAEMYE
LFPVLAQRRD LSAGTLSGGE QQMLAIARAM VAQPRVLLMD EPSMGLSPKL VDEVFRVIET
IRATGVTIVL VEQNARRALR AADTGYVLET GVVSHSGPAP RLLADRRVVD AYLGG