Gene Snas_5597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5597 
Symbol 
ID8886812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5947366 
End bp5948586 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content67% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003514320 
Protein GI291303042 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGATC AGGGGTTTGT CAGCGCGGCC GGACAACCTC GGTGTCACAT CCGAAATCGA 
GGGAAGGACA CCGAGATGAC CAACGACCGA GCCGCACTGC GGGAAGCACT GGAATGGGGA
GTCGAACAGG GAGCGCCCAG CGTCGCGGTG CAGGTCAGTG ACGCAGACGG GACCTGGTTC
GACGCGGTCG GCAAGAGCGA CCTGGTCACG GGCGCGGAAC GGGAACCGGG GGAGCAGCTG
CACACCGGCA GCATCTCCAA GGCCTTCACC GCCGTCGCGG CGCTGAACCT GGCCGCCGAG
GGCAGGCTCA GCCTCGACGA CACCGTCGAG AAGTGGCTGC CCGGCACCGC GAACGGCAAC
GGCTACGACG GTTCGACGAT CACACTGCGG CACCTGCTGA ACAACACCAG CGGCCTGTTC
GCGACCGGCA TGGCCGTGGA GGTCCAGAAC CGCTACAACA AACGCTCGGC CTTCGACAAG
CACCGCCACG ACGTGTGGGA GATCGACGAC GTGCTGAAGC TGGCGGTCTC CGAGCCGCCG
GTCGGCGAAC CGGGCGAGAA GTTCTGGTAC TCCAACGGCG GCTTCGGTTT CGCCGGGGCG
ATCATCGAGA GGGCCAGCGG TGCCAGCCTC GAATCCGAAG TGGAGCGCGC GGTGCGTCCG
CTGGGCCTGG CCAACACCTT CATGCGCGAA CGCGCCGACG AGGGCTACCG GGGCCCGCAC
CCCAAGGCGT ACTCGAAGCT GTTCGTGAAG GAGGGGGTGC GGCCCGAGGA CGTCACCGCC
GAGAACTGGC AGTCCATGAT GGAAGGACCG GAGCTGGAGC CGTTCGACAC CACCGACGTC
AACACCTCCG GTGGCTACGG GGCCGCCAAC GTCGTGTCGA ACTTCGACGA CCTGCTGGTG
TTCTACAAGG CGCTGATCAC CGGCAGCCTG CTGCCGCAGG AGCAGAACGC GGAGCTGTGG
AACACGGTGT CGACCAAGGG CGGGTACTGG ATGCTCAACT CCCGCTACGG GCTGGGCGTG
TGCGAGCTGA CGTTGTCGGA CGGGCAGAAG GTCCGCGGCG GCGGCGGTCA GAGCTTCGGC
ACCATCACGC TGGTACTGGG TTCGCCGGAC GGGGAGCGCA TGGTGGCCAT GCACACCAAC
AACGACTGGC TGACCTTCCC GGTCTTCGAC CGGATCACCG AGGCCGTGTT CGGCGCGAAC
GGGATCGGCC TGGAGGGTTG A
 
Protein sequence
MPDQGFVSAA GQPRCHIRNR GKDTEMTNDR AALREALEWG VEQGAPSVAV QVSDADGTWF 
DAVGKSDLVT GAEREPGEQL HTGSISKAFT AVAALNLAAE GRLSLDDTVE KWLPGTANGN
GYDGSTITLR HLLNNTSGLF ATGMAVEVQN RYNKRSAFDK HRHDVWEIDD VLKLAVSEPP
VGEPGEKFWY SNGGFGFAGA IIERASGASL ESEVERAVRP LGLANTFMRE RADEGYRGPH
PKAYSKLFVK EGVRPEDVTA ENWQSMMEGP ELEPFDTTDV NTSGGYGAAN VVSNFDDLLV
FYKALITGSL LPQEQNAELW NTVSTKGGYW MLNSRYGLGV CELTLSDGQK VRGGGGQSFG
TITLVLGSPD GERMVAMHTN NDWLTFPVFD RITEAVFGAN GIGLEG