Gene Snas_5594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5594 
Symbol 
ID8886809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5944941 
End bp5946239 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content75% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003514317 
Protein GI291303039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG TGACCTCGAA GTTCGCGATT CTCGCCCTGG CGGGGCTCAG CGCCTGGAAC 
GGGCTGGGCT TCGCCGGGAG CGCGCCCGGC TGGCGGGTGG CGCTGGCCGT GATCGTGGTG
GTGCCCGCGT ACCTGGCCGG GCGCCGCCTG GCGGGGCGGC GGGACGGCGA GTTCCTGGCC
GTCGTCACCG CGCTGACGGC GGCCAGCGCC GTGGTCGTGG AATGGGGCGC GGCCACCGCG
ACGCTGTGCG TCGCGGTCTT CGTCGCACTG CCCTGGCTGA TCGGCCGGTC CCGGCAGCAG
CAGGCCCGGC TGGTGACGGC CGAACGCGAG CGCGCCGACC AGCTGGAACG CGAGCAGCGG
CTGGTGGCCG AGCGGGCCCG GCTGGCCGAA CGGGCCCGGA TCGCGGCCGA CATGCACGAC
TCCCTGGGGC ACAGCCTGGC GCTCATCGCG TTGCGGGCGG GTTCGCTGGA GCTGGCCCAG
GGGCTGTCGG ACGAACACCG GCTCGCGGCC GAACGACTGC GGGCCGACGC GGTGTCGGCC
ACCGACGAGC TGCGCCACAC GATCGCGCTG CTGCGCTCCC CCGGCCAGGC CGCCGCCACC
CACCCGCCGG ACGAGGACGT CACCGCCCTC GTCGAGCGAG CCGTCGAAGC CGGCATGGCG
GTCACGTTGC GGCACAACGA AACCGAGGCG AACCGCCTCG ACGCGGAGCC CCCGATCGAG
CTGGTGAGCC GGGAGCCGGA GGCGGGCGGG ACGGCTGGCC ACGATGCGAA GCTCGCGGCT
GGGCAGGTGA GCCAAATGCC GGAAGCGGGC GGGACAGCTG GCTCCGGCTC GAAGCTCGCG
GCTGGGCAGG TGAGCCAAGC GCCGGGGGCA AGCGACACGG CTGGCCAGCC AGCGGCCGAG
CCGAGGAGCC AGCGGCTCGA CGGGAGCAAG GCGGCTCAGC CGACGCTGGT GGACCGAGCG
GTGTATCGCG TGGTTCAGGA GGGCTTGACC AACGCGGCGC GCTACGCTCC CGGGTCCGAT
GTGGAGGTCG TCGTGGAGCG GGCCGCCGAC GCGACCGAGG TGCGTGTGAC CAATGACGCG
CCGCGCGAGG TCCCGCTGTC GCTGGCCGGG ACCGGTCAGG GACTGACGGG CCTGCGCGAG
CGGGTCGAGC TGCTGGGCGG CAGCTTCGCG GCGGCCGGGC ACGGGCGCGG CTTCCGCGTC
GAGGCTCGCA TCCCGCATGC CGCGACACCG CCGCACGGCC CTGACACGAC GGCCCGACAG
CCCGACGATC CCACCGACAC GAACGGAGCC ACCCCGTGA
 
Protein sequence
MPAVTSKFAI LALAGLSAWN GLGFAGSAPG WRVALAVIVV VPAYLAGRRL AGRRDGEFLA 
VVTALTAASA VVVEWGAATA TLCVAVFVAL PWLIGRSRQQ QARLVTAERE RADQLEREQR
LVAERARLAE RARIAADMHD SLGHSLALIA LRAGSLELAQ GLSDEHRLAA ERLRADAVSA
TDELRHTIAL LRSPGQAAAT HPPDEDVTAL VERAVEAGMA VTLRHNETEA NRLDAEPPIE
LVSREPEAGG TAGHDAKLAA GQVSQMPEAG GTAGSGSKLA AGQVSQAPGA SDTAGQPAAE
PRSQRLDGSK AAQPTLVDRA VYRVVQEGLT NAARYAPGSD VEVVVERAAD ATEVRVTNDA
PREVPLSLAG TGQGLTGLRE RVELLGGSFA AAGHGRGFRV EARIPHAATP PHGPDTTARQ
PDDPTDTNGA TP