Gene Snas_5571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5571 
Symbol 
ID8886786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5919774 
End bp5920943 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content68% 
IMG OID 
Productacyltransferase 3 
Protein accessionYP_003514295 
Protein GI291303017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTAG GGATAGAAAC CCGGCCTGAC GACCAGGGCG CCACCCCGCC GCGCCCCGCG 
GCGCCCGCCC GGCCACGACT GGCCTATATA GACAATCTGC GCATCTTCCT GACCGCGCTG
GTGGTGGTCC ACCACGTCGC GGTGACCTAC GGCAACATCC CCGCCTGGTA CTACATCGAG
ACCGCCAAGG ATCCGAGCGG GACGATCCTG GACGTACTGG TGATCTTCAA TCAGACGTTC
TTCATGGGGT TCTTCTTCAT GATCTCGGGG TTCTTCGTCC CCGGATCCGT CGATCACAAG
GGGGGCAAGG GATTCATGCG GGGCCGCCTG CTGCGGCTCG GCGTCCCGCT GCTGTTGTTC
GCGCTGCTGC TGCGGCCGGT CCTGACCTTG CCGATGTACC TGGCGGACTA TCGCGACGAC
CTGCCCTACT GGCTGTTCTA CTTCGTCTCC TGGGACCCGG GTCCGATGTG GTTCGTCGAG
GTGCTGTTGG TGTTCTCACT GGGGTACCTG CTCGTCCGGC GGTGGACCGG CAAGCCCGAA
CTGCCGCGCC TGCCCGAGCC CGTCCCGGCG CGCGGCGACG GTCGGCTTCC CGGACCGCTG
GCGATCGTCG GATTCACGGT GGCGCTGACG CTGGTGACCT TCGCGTGGCG ACTGCTGGTC
TCCCCCGAGG CCTACTGGCC GATCGTCGGG CTGCCGACCC CCGCGTACCT GCCGCAGTAC
CTGGGGCTGT TCGTCGTCGG TGTCGTGGCG TATCGCCGGG GGTGGTTCGC CGGTATTCCG
CGTTCGGCGC TGTGGTGGAG TGGCGCGGCC ACGCTCGTAC TGGGTTTCGC CCGGTTGACG
ACGATCGGGA TGACCGGGGA CGGCGCCGCG GTCCGGCTGC TGCAACTGGC GGCCGAGTCC
GGCTTCGCCG TCAGCGTCGT GCTGTTCCTG CTGTCGCTGT TCCAGCGGTT CCTCAACCGG
CAGAATGCGA CGGCGAAGTT CTTGTCCGAC AACGCTTTCG GGGTCTACTT CCTGCACCCG
CTGACCTTGG TGGTCGCGGC GTTGGCGCTG CGGGGTTGGG AGGCGACCGC GATCGCGAAG
TTCGCGGTGC TCTGCCTGAT CGGGGTGCCG CTGAGCTGGG GTGCGGCCTG GCTGCTGCGG
CGGATTCCCG GCGCCCGGCG GATCTTCTAA
 
Protein sequence
MTLGIETRPD DQGATPPRPA APARPRLAYI DNLRIFLTAL VVVHHVAVTY GNIPAWYYIE 
TAKDPSGTIL DVLVIFNQTF FMGFFFMISG FFVPGSVDHK GGKGFMRGRL LRLGVPLLLF
ALLLRPVLTL PMYLADYRDD LPYWLFYFVS WDPGPMWFVE VLLVFSLGYL LVRRWTGKPE
LPRLPEPVPA RGDGRLPGPL AIVGFTVALT LVTFAWRLLV SPEAYWPIVG LPTPAYLPQY
LGLFVVGVVA YRRGWFAGIP RSALWWSGAA TLVLGFARLT TIGMTGDGAA VRLLQLAAES
GFAVSVVLFL LSLFQRFLNR QNATAKFLSD NAFGVYFLHP LTLVVAALAL RGWEATAIAK
FAVLCLIGVP LSWGAAWLLR RIPGARRIF