Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5544 |
Symbol | |
ID | 8886758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5890378 |
End bp | 5891769 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003514268 |
Protein GI | 291302990 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.258636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.142482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTTTGA CTCATCCACC GTCCGCACTC ATCGACGGCT CGCCCCGGCT GCGGCTACGG TCGCCGCCCA CGTACTGGCG CTGTGAACCG TCCTGGGTGT GGCAGGCGCG GCCGCTGACC GACCATCTGC TGTGGCATGT GCACGACGGC GCCGGGGAGC TGCGGCTCGA CGACAGGCAC GTGCGGCTGC GGCCGGGGTT CTGCGCGGTG TTCGCGCCCG GCGACGCGCC GGTGGCCACC CACGATCCGC GACATCCGCT GCTGGTCTTC GGCATGCACT TCACCGCCAC GGGCTTCGAC GGCGATCTGG TCCCCGAGCA ACGCTGGTGC CGGTTGTGGG ACCAGGAGTT CGCCGTCCGG CTGGCGCGGC ACTGCGACTA CGCCCACCGA CGCGGCGACG ACCTCGGGCA GCGGCAGGCG GTGCTCGGCC TGGAACAGTT CCTCTGTCTA TTGTGGGATA ACGTGACGCG TCCAGCTCCC GGCCCCGGGG ACGCCGCCGT CGAGGACATC GCCCGGGCGG TCCGGCAGGA ACCCAGCCGC GACTGGACCG TCGCGACGCT CGCCAAGCGG GCCAACCTTT CCCGTGCCCA GTTCACCCGC CGCTTCACCG CCCACACCGG CTACTCCCCC GCGCGGTACG TGATCCGGGC CCGGCTCGAC CGGGCCCGGC AGCTGTTGAC CGAGACCAAC ATGTCCGTCG GCCAGGTCGC CGCCACCCTG GGGTACCCCG ACGTCGGTTA TTTCAGTCGC CAGTACAAAG TCCACACCGG TTCCTCACCC AGTAGGGATC GCGGTGGCGG CGAAACTTCC GTAGATTGGT TAATGCGGGT ACCAACAGTG CCGTTGTCCC CTAACATCCA GGGGCGATCA GACTATAGGA GCCGCAGCGT GATCACGGAA TACCAAGCGC CCAACGGCTT CGCCACCATC CCCAGACAAC GGTCCCTTCG AGAACACCCC CTGATCGCCG CGTTGTTGTC CCTCGAACTC GATCCCCGTG ACTACGTCAT CTTCGGCAGC GGGCCGCTGC TGGCCCACGG GTTGCGCGCG GACGTCGCCG ACCTGGACGT CGTCGCCCGA GGACGGGCCT GGCACCGGGC ACTGCGGATG TCCGGCTACT CCATCGATCT GGGACCGCAC AGCTTCGAGC TCATGCTGCG GTTCTTCGGC GGCGGCGTCG AGATCTCCGC CTACTGGACC GACACCAGCT GGGACGTCGA CGCGCTCATC GACACCGCCG AGATCATCGA CGGACTCCGG TTCGCCGCGC TGCGGGATGT GCTGGAGTAC AAGCGAACCC TCGATCGCGC CAAGGACCGC GCCGATGTCG CCGCCCTGGA GCGACACCTG TCCACGGCGG AAGAACTCGA ACCGGTGCTG TGCGCGGCCT GA
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Protein sequence | MFLTHPPSAL IDGSPRLRLR SPPTYWRCEP SWVWQARPLT DHLLWHVHDG AGELRLDDRH VRLRPGFCAV FAPGDAPVAT HDPRHPLLVF GMHFTATGFD GDLVPEQRWC RLWDQEFAVR LARHCDYAHR RGDDLGQRQA VLGLEQFLCL LWDNVTRPAP GPGDAAVEDI ARAVRQEPSR DWTVATLAKR ANLSRAQFTR RFTAHTGYSP ARYVIRARLD RARQLLTETN MSVGQVAATL GYPDVGYFSR QYKVHTGSSP SRDRGGGETS VDWLMRVPTV PLSPNIQGRS DYRSRSVITE YQAPNGFATI PRQRSLREHP LIAALLSLEL DPRDYVIFGS GPLLAHGLRA DVADLDVVAR GRAWHRALRM SGYSIDLGPH SFELMLRFFG GGVEISAYWT DTSWDVDALI DTAEIIDGLR FAALRDVLEY KRTLDRAKDR ADVAALERHL STAEELEPVL CAA
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