Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5528 |
Symbol | |
ID | 8886742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5874114 |
End bp | 5875958 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003514252 |
Protein GI | 291302974 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA ACACCGCTAC CCGGTCCTGG CGCGGCAAGG CCGAGGACGA CGAGGAACGC ACCACCGCCG AGTCCGGCGA CGCCGCCTCG GTGAAGAACC TGCGCGGCCG CAGCCGGGCG CTGCTGGGTT CACTGCTGCG ACCGCACCGG ACCCGGATCT TCGGGATCAT CGCGTTGCTG CTGTTGATGA GCGGCGCGAA CCTGGCCGGG CCGTACCTGG TGCAGCTGGG CATCGACTCC GGTATCCCGC CGCTGGTCGA CGGCGGCGAC TACACCGTCA TCGCCTGGGT CGGCGTCGGC TTCGTCGTCG TGACCATCGT GGACTATCTG GCCACCCGCG GCGACGTCTC GCTGACCGGC AAGGTCAGCC AGGAACTGCT GCTGGACCTG CGGCAGCGGG TGTTCCGGCA CTTCAACCGG CTGTCGGTGA ACTTCCACGA GCGCTTCACC TCGGGACGGG TCGTGGCCCG GATGACGTCC GACATGGACG CTATCCGGGA ACTGTCCGAC AACGGCGTCC ACGACCTGGT GCTGTCGGTC CTGAACGTGG TGGCGATCGC GGGCATCATG CTGTGGATGG ACACCGAGCT GGCCCTGGTG GCGCTGTTGT CCTTCCCGGT CATGGCGGTG CTGGCCAACT GGTTCCGCAA GTACTCCACT GTGGTCTACC GACGGACCCG TGAGACCATC GCGCTGGTCA TCGTCTACTT CGTGGAGTCG ATGGGCGGCG TGCGCGCGGT GCAGTCCTAC CGCCGCGAAC CCCGCAACCA GCACATCTTC GACGGCCTCA ACGCCGACAA CCGCGACGCC AACATCAACG GCCACCGCGC CGCGGCGCTG TTCGCCGCCG GTACCAAGGG CATCGGCAAC GTGTGCGTGG CCGTGGTGCT GGTGTACGGC GGGTTCCTGG TCATGGAGGG CCAGACCCAG ATCGGTGTGC TGGCGGCGTT CCTGTTGTAC CTGCGGCGGT TCTACGAACC GATGCAGGAA CTGACGATGT TCTACAACAC GCTGCAGTCG GCCACCGCGG CGCTGGAGAA GCTGGCCGGG GTGCTCGACG AGGAACCCGA CGTCGCCGAA CCCCGCGAAC CGACCCCGCT TCCCCAGGCC CGCGGCCAGA TCGACTTCAC CGGCGTGGGT TTCTCCTACC GCACCGGCAC CGTGGTGCTG CCCGAGTTCG ACCTGCGCAT CCCGGCGGGC CAGACGGTCG CGATCGTCGG CGCCACCGGC GCGGGCAAGA CCACGGTGGC CAAGCTGGTG GCGCGCTTCT ACGACCCGGT CGAGGGCGTG GTGAGCCTGG ACGGCGTCGA CCTGCGGCGG TTGGCCCAGA CCGATCTGCG CCGCGCCATC GCCATGGTCA CCCAGGAGAA CTTCCTGTTC AACGGGACCG TCGGCGAGAA CATCGCCTTC GGCCGTCCCG ACGCCAGCCG CGCCGACGTT CGGACAGCGG CCCGGGCGAT CGGCGCCGAC GAGTTCATCG CGGCGCTGCC CGACGGCTAC GACACCGACG TGCGCAAACG CGGCGGCCGG CTGTCGGCGG GACAGCGTCA GCTGGTCGCC TTCGCCCGTG CCTTCCTCGC CGACCCCCGG GTGCTGATCC TGGACGAGGC GACCTCCTCG CTGGACATCC CCAGCGAACG GCTGGTCCAG CGCGCGCTGC GCACCATCCT GGCCGACCGG ACCGCCATCA TCATCGCCCA CCGGCTGTCG ACGGTGGAGA TCGCGGACCG GGTGCTGGTC ATGGAAGCGG GCCGCGTCGT CGAGGACGGC CCGCCCCAGA CCCTGATCGA GAACAGCGGG CAGTACGCCC GGCTGCACGA GCAGTGGCAG GACAGTCTGG TGTGA
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Protein sequence | MSTNTATRSW RGKAEDDEER TTAESGDAAS VKNLRGRSRA LLGSLLRPHR TRIFGIIALL LLMSGANLAG PYLVQLGIDS GIPPLVDGGD YTVIAWVGVG FVVVTIVDYL ATRGDVSLTG KVSQELLLDL RQRVFRHFNR LSVNFHERFT SGRVVARMTS DMDAIRELSD NGVHDLVLSV LNVVAIAGIM LWMDTELALV ALLSFPVMAV LANWFRKYST VVYRRTRETI ALVIVYFVES MGGVRAVQSY RREPRNQHIF DGLNADNRDA NINGHRAAAL FAAGTKGIGN VCVAVVLVYG GFLVMEGQTQ IGVLAAFLLY LRRFYEPMQE LTMFYNTLQS ATAALEKLAG VLDEEPDVAE PREPTPLPQA RGQIDFTGVG FSYRTGTVVL PEFDLRIPAG QTVAIVGATG AGKTTVAKLV ARFYDPVEGV VSLDGVDLRR LAQTDLRRAI AMVTQENFLF NGTVGENIAF GRPDASRADV RTAARAIGAD EFIAALPDGY DTDVRKRGGR LSAGQRQLVA FARAFLADPR VLILDEATSS LDIPSERLVQ RALRTILADR TAIIIAHRLS TVEIADRVLV MEAGRVVEDG PPQTLIENSG QYARLHEQWQ DSLV
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