| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5522 |
|---|
| Symbol | |
|---|
| ID | 8886736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5866440 |
|---|
| End bp | 5867555 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003514246 |
|---|
| Protein GI | 291302968 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.853914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGT CCACACTGCT GAAGGCTGGC CTGGGTGCCG TCGGCGGTGC CGCGGTACTG
GGCGGAGGCG CTCTCGCGTA CGCCTCCGGG GACAGCAGCG GGAAGAAGGA AACCCGTGCC
GGGGTCACGG TCAAGAAGAT CGCCGACCTC ACCGGCAACG ACAACACGAT CAAGTTCGGT
GTCAACGGCA CCGACCTGGG AATTCCCGTG GTGACACCGC AGGGCAAGAA CCTGTACATC
TTCGGGGACA GTTACGAGGG GCCCAAGCCG ACGCCGGAGG ACGCCAACTG GCGTTCCCCC
ATCGGTTTGT TCAGCGGCAC GACGGATCTG CCCTCCGGGC TGGTCTTCGA CGGCGCCATC
GGCGGCGAGG TCGCGCGTCA GTTGTGGGAC TACCAGCACA ACAACGGGGA GTTCTCCACT
GTGCTGCCGT CCGACATCAT CACCATCGGC GACACCATGT TCCTTCAGGT CATGGTGCAC
GGCGAGAAAC TGGGCGACGT CCTGCGTTCG GAGATCTGGT CGTCCAAGGA CGAGGGTGAG
TCCTGGCAGG ACACCCAGGC GCGTTGGGCC GGTGACGTCC ACGGTGGCCG GATGCAGCAG
TTGACCTGGG CCCTGGACGA CGACGACATG GTCTATGTCT TCTCCAGCCG GTTCGACCGC
TCCGTGGGCT TCATCCTGCA CCGGGTCCAC AAGGACGCCA TCGCCGACAC CAACGCCTAC
GAGTGGTGGG GCTGGGACGA GGGCACCAAG AAGTGGGACT GGAACATCGG CACTCCCGGC
GAGGTGTGGA CCCAGCCCAC CGGCGAGATG TGCCTGCGCC GTCTTGAGGG CAAGTGGGTG
ATGACCTGGT TCAACGCCAG CCAGGGCAAG GAGAGCATTG ACGGCCTCGT GTTCGACAAG
CCCAATGACG ACCTCACCAA GGCCCACCAC AAGCAGCTCA TCCTCAACAC CCCCTGGGGT
CAGGAGGACG ACTCGCACGT CGCGCAGCTG TACGGCGGCT ACATCATTCC CGGCTCGACC
ATCAACGACC TGCACCTGGT CGTGAGCCAG TGGAAGACCG ACGACCACTC GGTGTACCGC
TCGATGCAGC ACCGGGTGCA GGGCTTGGCC GACTGA
|
|---|
| Protein sequence | MKRSTLLKAG LGAVGGAAVL GGGALAYASG DSSGKKETRA GVTVKKIADL TGNDNTIKFG
VNGTDLGIPV VTPQGKNLYI FGDSYEGPKP TPEDANWRSP IGLFSGTTDL PSGLVFDGAI
GGEVARQLWD YQHNNGEFST VLPSDIITIG DTMFLQVMVH GEKLGDVLRS EIWSSKDEGE
SWQDTQARWA GDVHGGRMQQ LTWALDDDDM VYVFSSRFDR SVGFILHRVH KDAIADTNAY
EWWGWDEGTK KWDWNIGTPG EVWTQPTGEM CLRRLEGKWV MTWFNASQGK ESIDGLVFDK
PNDDLTKAHH KQLILNTPWG QEDDSHVAQL YGGYIIPGST INDLHLVVSQ WKTDDHSVYR
SMQHRVQGLA D
|
|---|
| |