Gene Snas_5470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5470 
Symbol 
ID8886681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5802577 
End bp5805036 
Gene Length2460 bp 
Protein Length819 aa 
Translation table11 
GC content72% 
IMG OID 
ProductComEC/Rec2-related protein 
Protein accessionYP_003514194 
Protein GI291302916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCGG GCGAAGCCGG TGCTTCGGTT GCCGGACAAG GGGAGACGTC GAACTCGGCG 
CCTGATCTGC GGCTGGCGTT CGTGGCGCTG GGCGTGTGGG TGGCTGCGGT GGCGGTCCTG
TACCTGGGAG CCGGGTGGGG CATTGGCCTG TCGATCGTCG CTTGTGGCGG CGTTTGGTTC
GGCAGCCGTG GCGGCCGAGC GTGGGCGAAA GTCGCCGGAG CCATCGCCAT CGGTGTGGTG
GCCGGGGCGG TCATCGCTTC GGCCCAGGTG GCAGTGCGGG ACGCGCTGCC GTTCCGCGAC
TGGGTGGACG ACGAACGGGT GGCCACGATG CGGGTGACCG TGACCGACGA CCCGCTGCGG
CTGCGAGGCG GACAGGGCGA GAAGTACCGG GTCGCGGTGC GGGTGCAGCG GGCTCGCGTG
GGAAACACCG AGGTGGAGGT CTCGGTGCGG GCCGTGGTCT TCTCCCCGGA CGTGGGTCGC
TGGCGATGGG CCACGGTGCT GCCGGGCCAG GAACTGACGA TCAAGGGACG GCTGGCCCCG
GGCGAGACGG GCACGCTGGG CGCGGCCGAC GTCGCCGTAT CCCGAGCACC CCGCCTGCAC
GGCGAACCAC CGTGGTGGCA ACAAGCGGCG GGGTACCTGC GGGCCGGGCT GCGCGAAGCC
TGCGCCGACC TCCCCGATGA GGCCGCCGGA CTGTTGCCGG GGCTGGCACT CGGCGATGTG
AGCACCATGG ACGAGGGAGT CGACGCGGAC TTCCGAGACG CCGGAATGAC GCACCTGCTG
GCGGTCTCGG GCTCGAACGT GGCCATCGTC GTGGGAGCCG CGGTACTGAT CGCGATCGGC
TGTGGAGCGG GACGCCGCAC TCGGGTCACC GTCGGAATCG CGGTGATCGT CGGGTTCGTC
GTACTGGTCC GCCCCTCCCC GAGCGTGCTG CGGGCGGCGG TCATGGGCGG GCTCGGTCTG
CTGGTCCTGT CGCGACGGGG CGGCCGCGAC GCGGTGCCGG TCCTGTCAGC GGCGGTGGCC
CTGCTGCTCC TCATCGACCC GGGCCTGGCG ACGAACCTGG GGTTCGTGCT GTCCGTCGTG
GCCACAGCGG GTCTGGTGTT CTTCGCCTCC CGCTGGATCG CCTTGCTGCG GCGGCGTGGC
TGGCCGGAAT GGCTGGCGGC CGTGGTGGCG GTCCCGGCCG CGGCCCAGCT GGCGGTGACC
CCGGTACTGG CCGCGGCCAC CGGCACGATC ACCCCGGTGG CGGTGGTGGC CAACGCGCTG
GCGGCCATAG CCGTCCCACC GGCGACGGTA CTGGCGGTGG CCGCCACGAT GGTGTGGCCA
CTGTGGCCAG ACTTGGCGTT CGTGCTGACC TGGTTGGCGT CTTGGCCCGC CCAATGGCTG
GTGTCCGTCG CCACTCACGC GGCCCAGATC CCGTCGGGGT CACTGCCGTG GCCATCGGGC
TTCCTGCCGG GCCTACTACT GGCCCTGCTC ATCGCGGTGG CCCTGGTGCT GCTGCGCTGG
CGAGCCGGAC GCCGCATCCT GCTGGTCCTG CTGCTGGGCA TAGCGATCGG TGTGGTCCCG
GTCCGAATGC TGAGCGGGGG CTGGCCACCG AGCGGCTGGG TGATGGTGGT CTGCGACGTG
GGGCAAGGCG ACGCGCTTGT CCTGCCCACG GGTCACGACT CACGGGTCGT CGTGGTGGAC
GCGGGACCCG ACCCGCGTGC CATCGACGAC TGCTTGCGCT CGCTGGGTGT GGAGCGGGTG
GCGCTACTGG CGTTCAGCCA CGCGCACGCG GACCACATCG GCGGCGTCGC GGGTGTCTAC
AGTGGCCGAA CCGTGGAGGC GGTCCTACCG CCGATGTCCG ACGGCCACGG GTCCTCGGGC
ACCGATCGCC CGTCCGGCGT CGGCCCGCCA CCAGGCCGCG ATCGACTCCC CGCTCTGCAT
GGTGAGCCGC CGGGTTCTGG TGGGAGTGGT TGGCCAGCGG GGCCGGGGGC GGGGGAGCGG
CTTGCCGAGG CGATCCGGGA GACGCCGACG GTGACCGTGC GGGTTGGCGA CAGTGTTGGC
GCGGGGAGAA CTCGGTTGGA GGTGCTGGCG CCCGATACGG AGTTCAGCGG GACGCGTTCG
GATCCGAACA ACAACTCGTT CGTGTTGCGC GCGGTCGTTG GTGGGGTGTC GATCTTGCTG
TCGGGGGACG TGGAGGAACC GGCGCAGCGG TCGGTGTTGG CGTCCGGGCA GCGGCTCGCG
TCGGATGTGT TGAAGGTGCC GCATCACGGG TCGGCGTACT TCGACGACGG ATTCTTCGAG
GCGGTGAAGC CGAGATTGGC CGTCGTCAGC GCGGGGCGCG GCAACGACTA CGGGCACCCG
CATCCCAGGG CGTTGCGGCA GTTGCGGCGG CAGGGTGCGG CGGTGCATCG CACCGATCGG
GACGGCAGTT TCGCCGTGGT TGCCGGGGAC GGTGGGCTGG CGGTGGTGAC AATGGACTGA
 
Protein sequence
MSAGEAGASV AGQGETSNSA PDLRLAFVAL GVWVAAVAVL YLGAGWGIGL SIVACGGVWF 
GSRGGRAWAK VAGAIAIGVV AGAVIASAQV AVRDALPFRD WVDDERVATM RVTVTDDPLR
LRGGQGEKYR VAVRVQRARV GNTEVEVSVR AVVFSPDVGR WRWATVLPGQ ELTIKGRLAP
GETGTLGAAD VAVSRAPRLH GEPPWWQQAA GYLRAGLREA CADLPDEAAG LLPGLALGDV
STMDEGVDAD FRDAGMTHLL AVSGSNVAIV VGAAVLIAIG CGAGRRTRVT VGIAVIVGFV
VLVRPSPSVL RAAVMGGLGL LVLSRRGGRD AVPVLSAAVA LLLLIDPGLA TNLGFVLSVV
ATAGLVFFAS RWIALLRRRG WPEWLAAVVA VPAAAQLAVT PVLAAATGTI TPVAVVANAL
AAIAVPPATV LAVAATMVWP LWPDLAFVLT WLASWPAQWL VSVATHAAQI PSGSLPWPSG
FLPGLLLALL IAVALVLLRW RAGRRILLVL LLGIAIGVVP VRMLSGGWPP SGWVMVVCDV
GQGDALVLPT GHDSRVVVVD AGPDPRAIDD CLRSLGVERV ALLAFSHAHA DHIGGVAGVY
SGRTVEAVLP PMSDGHGSSG TDRPSGVGPP PGRDRLPALH GEPPGSGGSG WPAGPGAGER
LAEAIRETPT VTVRVGDSVG AGRTRLEVLA PDTEFSGTRS DPNNNSFVLR AVVGGVSILL
SGDVEEPAQR SVLASGQRLA SDVLKVPHHG SAYFDDGFFE AVKPRLAVVS AGRGNDYGHP
HPRALRQLRR QGAAVHRTDR DGSFAVVAGD GGLAVVTMD