Gene Snas_5430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5430 
Symbol 
ID8886639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5760581 
End bp5761090 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content64% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003514155 
Protein GI291302877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC CCAGGAACCA CTCCAGCAAC AGCGACCACG ACGACGCCCA TTCAGGGCGG 
GGGCGGCTCG CGCGCCGCCT GGACGCCCTG TTCGTCAACC AGGGTGTGTC GAACTCGAAG
GTCGCCGACG ATTTGACCAA CGCCGGAGTC AAGGTTTCCC ACGGCTACCT GTCTCTACTG
CGACGCGACC AACGCGACGA CCCCAGCTAC CGCCTACTTC AGGCTCTGGC GGACTACTTC
GGGGTCACCA CCGAGTACTT CAGCGGCCCC GACCCCGACT ATCAGGACAA CGAAGTCGCC
GCGGTCATGG AGATTGCCAA CGCCGAACGC GTCCGCGCCA TCGCCCACCA CGCCTCCGGG
CTGTCGCCCG AATCCGTCGA ACTGATTCAG CTGATGATCG CCAAGGCCCG CGCCGCGGAA
GGACTTCCAC CCATCGAAGC CAAGGCACCG CGATCCGAAA ACGCGGGGAA TGACCCAGAT
GTTTCATCAT CTGAAAACCC CGCGACTTGA
 
Protein sequence
MNDPRNHSSN SDHDDAHSGR GRLARRLDAL FVNQGVSNSK VADDLTNAGV KVSHGYLSLL 
RRDQRDDPSY RLLQALADYF GVTTEYFSGP DPDYQDNEVA AVMEIANAER VRAIAHHASG
LSPESVELIQ LMIAKARAAE GLPPIEAKAP RSENAGNDPD VSSSENPAT