| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5394 |
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| Symbol | |
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| ID | 8886603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 5725587 |
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| End bp | 5726276 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003514119 |
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| Protein GI | 291302841 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.801422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.551165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTGATGC GGCCAGGTCT GCTGGCATTG ACCGGGCGCA TCGGCCACGC CGAGGCCCAC
ACCCACGCCT GCCATCAACT GCTCATCGTG GCCAGCGGCC ACGTCGTTGT CGAAGACGAC
CACCACGACC GGTACCCGGT ACAGGGCGTG GCCTTCATCC CGGCCGGATT CCGTCACCGC
GTCATCGCCA GCCCGGACGC CTCTGGGCTG GCGGCCTGGT TCGACGCCGA CTCGCCCATC
GGCCTGGCCG CCGCCACCCG GTGGCACGGC GCCGGCGACC TGGGCTGCGC CCGCACGTGG
ACCACAGCCG TGGCGGGCCT GCCGCGGCTC ACCGATGCCA CACCGCACCG GCCGGCGCGA
CCCCAGCACC CGGTTCTGGC CCGAGCCATT CACCACGCCA CCACCACCCC AAGCGGCCCA
CCCGACCTGG AAACCCTCGC CGCTGCGGTG TCGATGTCTC CCAGCCGCTT GGGGCACCTG
TTCGCCGAAC GCCTCGGGTT GTCGTATCCG ATATGGCGGC GCTGGATCAT GCTGCAACGC
GCCATCGACG CGGTACGCGC GGGCGCCAAC CTCACCGCCG CCGCCCACAC GACCGGATTC
GCCGACTCCG CGCACCTGAC CCGCACCACC AAAGCCATGT TCGGCATCAC CCCCACTCAA
GCCCTGACCG CCAGCGGCTG GCGGCCCTGA
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| Protein sequence | MVMRPGLLAL TGRIGHAEAH THACHQLLIV ASGHVVVEDD HHDRYPVQGV AFIPAGFRHR
VIASPDASGL AAWFDADSPI GLAAATRWHG AGDLGCARTW TTAVAGLPRL TDATPHRPAR
PQHPVLARAI HHATTTPSGP PDLETLAAAV SMSPSRLGHL FAERLGLSYP IWRRWIMLQR
AIDAVRAGAN LTAAAHTTGF ADSAHLTRTT KAMFGITPTQ ALTASGWRP
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