Gene Snas_5392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5392 
Symbol 
ID8886601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5724395 
End bp5725117 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID 
Productcation efflux protein 
Protein accessionYP_003514117 
Protein GI291302839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.517695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG TGTCTTTGAC CGCCGAGCGT CGGGCGAAGC TGAACAAGCG CTGTCTCCAT 
CTGGCTTATG CCACCGCCGG ATACAACCTG GCTGAAGGCA TCGTCGCCGT CACCGCCGGG
GCCATCGCCT CGTCCACCGC GCTGCTTGGT TTCGGGCTGG ACTCCTTCGT CGAAGTCTCC
TCCGCGCTGG TGGTGATCTG GCAGTTCCGA TCCAAGCTGC CCGAAGCCCG CGAAAAACTC
GCCCTCAAAC TCATCGCCGC CTCGTTCTTC GCCCTGGCCG CGTGGATCAC CATCGACGCC
GTGCGATCGC TTCTGGGCCA AGGTGAGGCC GAACCCTCCC CGGTCGGCAT CGCCATCGCC
GCGGTCTCGG TGATCGTCAT GCCAGCCCTG GTGTGGGCCA AACGCCGCAC CGGCAAAGAA
CTCGGCTCGG CCACCGTCGT GGCCGACTCG GTGCAAACCC TGCTGTGCAC CTACCTGTCC
GGCATCCTCC TCATCGGACT CGTACTCAAC GCGACACTGG GCTGGTCGTG GGCCGACCCG
ATCGCCGCCC TGGTCATCGC CGCCGTCGCG ATCAAAGAAG GTGTGGAAGC CTGGCGCGGC
GAACAATGCG ACGACTGCGC CATCCCCACC GGTGACGGCG GCCAAGCCGA TGCGTGCGGA
TGCGGCCCCG ACTGCACCGA CGCCTGCTGC ACCGGCCAGA AGAAGGACGG TGAGACAACA
TGA
 
Protein sequence
MATVSLTAER RAKLNKRCLH LAYATAGYNL AEGIVAVTAG AIASSTALLG FGLDSFVEVS 
SALVVIWQFR SKLPEAREKL ALKLIAASFF ALAAWITIDA VRSLLGQGEA EPSPVGIAIA
AVSVIVMPAL VWAKRRTGKE LGSATVVADS VQTLLCTYLS GILLIGLVLN ATLGWSWADP
IAALVIAAVA IKEGVEAWRG EQCDDCAIPT GDGGQADACG CGPDCTDACC TGQKKDGETT