Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5359 |
Symbol | |
ID | 8886568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5695035 |
End bp | 5695562 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
Protein accession | YP_003514085 |
Protein GI | 291302807 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.1599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTACC GCGAGCCAAC CCAAACCGCT CCCCGCATCC CCCGCTCCAC CCTCTCCGCC GCCCACCGCA CCCTGGGCGA AGCCCACGGC GCCGTCCCCG CCAACGCAAC CGTCTTCGAC ACCCACCTCC CCGCCATAGC CAACCTCAAC CCCGACCTCC TCAACGCCCT ACACCAAGCC GCCACCGACG CGGCCCACCA CGGCATCACC TTCACGGTCA ACGGCGGCTG GCGCTCCCCC GAATACCAAC AACACCTCCT CCAAGAAGCC ATCACCACCT ACGGCTCAGC CACCGAAGCC GCCCGCTGGG TCGCCACCCC CGACACATCC CCCCACGTAT CCGGCCACGC CATCGACCTC GGCCCCACCA AAACCACCCG CTGGCTCTCC ACCCACGGCT CCAAATACGG CCTATGCCAA ATCTTCGACA ACGAACCCTG GCACTACGAA CTCCGCCCCG AAGCCATCAC CCACGGCTGC CCACCCCGCT ACCCCGACCC CTCCCACGAC CCCCGCATGC GCCGCTAA
|
Protein sequence | MTYREPTQTA PRIPRSTLSA AHRTLGEAHG AVPANATVFD THLPAIANLN PDLLNALHQA ATDAAHHGIT FTVNGGWRSP EYQQHLLQEA ITTYGSATEA ARWVATPDTS PHVSGHAIDL GPTKTTRWLS THGSKYGLCQ IFDNEPWHYE LRPEAITHGC PPRYPDPSHD PRMRR
|
| |