| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5330 |
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| Symbol | |
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| ID | 8886539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5659484 |
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| End bp | 5661367 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_003514057 |
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| Protein GI | 291302779 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCATCT ACCTCGACCT GCTGGCCCGC GAGGCCACCG CCGTCGAATT CGAGGGCCCC
ATCACCAAGG CCCGCACCAG CGGCGCCAGC GCCGAGGAAC TGGCCGAGCT CGAAGAGGCC
AAGCTCGCGG CGCTGCGGGT GCGCGCCCTG CTGGCCCGCC GCGCCCGCCG CGAAGCCGAA
CTGTCGGCGC TGTTCGACAC CGCCGGGGAC CTGGCCGGAC TGCGCGACCT CGACGCCGTC
CTGCAGGCGA TCGTGCGCCG GGCCCGGCAG CTGCTGGGCA CCGACACCTC GTACATGACC
CTGATCGACG ACGAACGCGG CGACACCTAC ATGCGCGTCA CCGACGGCTC CATCTCGCCC
GCGTTCCAGT CGCTGCGACT GCCGTTGGGC GCGGGTCTGG GCGGCCTGGT CGCGCAGACC
GCCTCCCCCT ACGCCAGCGC CACGTACCAG GCCGACGCCC GGTTCCGGCA CACCGAATGG
ATCGACTCGG CCGTCGGCGA CGAGGGCCTG GTCGGCATCC TCGGCGTGCC ACTGAAACTC
GGCGACCGGG TCATCGGCGT CCTGTTCGCC GCCGACCGCT CCGAACGCTC CTTCGGACAG
GAGGAAGTGG CGCTGCTGTG CTCGCTGGCC GCCCACGCCG CCGTCGCCAT CGACAACACC
CGACTGCTGC ACGAGACCCG CGCGGCCCTC GAGGAACTCA GCGCCGCCAG CGAGATCGCC
CGGGAACGCA ACGCCGCCGT CGAACGCGCG GGCCGGGCCC ACGACCGCAT GACCGACATC
GTGGTGCGCG GGGGAGGAGT ACAGGACGTG GCCGCCGTCG TCACAGACAT CCTCGGCGGC
GCGGTCCTGG TGCTGGACAC CGACGGCCAG CGCCTCGCCG AGGTCGGCAC CCCGTCCGGC
GACGCGATCC TCGCCGAACT GTCCGACGGA GACGGCGAAC CGGCCGTGGT CGCGAACCGA
GCCCGCGGCC GGGTCACCCG CCGCGGCCCC GTCTGGATGG CGGCCATCGC GGCGGGCAAG
GAGACCTTCG GAACCCTGTT CCTGCGCACC GACACCGAAC TGTCCGACGC CGACGAACGC
ATCGTCGAAC GCGCCGCCGT CGTCACCGCG CTGCTGTCGC TGTTCCGCCG CAGCGCCACC
GAAGCCGAGG CCCGGGTCCG CGGCGAACTG CTCGACGACC TGGTGAGCGG ACGCATCGGC
GACACCGACA CCCTCGACAG CCGCGCCCGC CTGCTCGGCG TCGACCTGCG CACCCCACAC
GTCCTGCTGT CCGTACCCCA CAACAGAAGC CGCGAACGCG CCACCTTCTG GGCCGCCGGA
CTGGCCCGCG CCGCCCACGG CCTGAGCACC GCCTACCACG ACGAAGTCCT GCTGCTGCTC
CCCGGCGACC ACCCCGGCGA GGCGGCCCGC AAGGCCGCCC GCGAACTGGG CCAAGCCCTC
GGCACCCCCG CCACCGTCGG CGCCGCCGGA CCGATCCACC TACCCACCGG AGCCCAAACC
GCCCACCGCG AAGCCCGCCG CTGCGCCGAA GCCCTCACCG CCCTGGGCCG CGAAGGCGAC
GGCGCCAGCT CCGGCGAACT CGGATTCGTC GGACTACTGC TGGGCGGCGG CCAGGACGTC
CAACCCTTCC TCACCAGCGC CCTGGGACCG GTCATCGGCT ACGACTCCAG GCGCGGCACC
GAACTGGCCA CCACACTGGA GGCCTACTAC GCGGCGGGCA AGAGCCCCTC CAAGGCCGCC
GACGCGCTGC ACGTCCACGC CAACACCGTC GCCCAACGGC TGGAACGGAT CGGGCGCCTC
CTCGGCGAGG ACTGGCAGCA CCCCGACAAC GAACTCGAAC TCCGCCTCGC CCTCAAGCTG
TACCGACTCC ACCACGACAC GTGA
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| Protein sequence | MRIYLDLLAR EATAVEFEGP ITKARTSGAS AEELAELEEA KLAALRVRAL LARRARREAE
LSALFDTAGD LAGLRDLDAV LQAIVRRARQ LLGTDTSYMT LIDDERGDTY MRVTDGSISP
AFQSLRLPLG AGLGGLVAQT ASPYASATYQ ADARFRHTEW IDSAVGDEGL VGILGVPLKL
GDRVIGVLFA ADRSERSFGQ EEVALLCSLA AHAAVAIDNT RLLHETRAAL EELSAASEIA
RERNAAVERA GRAHDRMTDI VVRGGGVQDV AAVVTDILGG AVLVLDTDGQ RLAEVGTPSG
DAILAELSDG DGEPAVVANR ARGRVTRRGP VWMAAIAAGK ETFGTLFLRT DTELSDADER
IVERAAVVTA LLSLFRRSAT EAEARVRGEL LDDLVSGRIG DTDTLDSRAR LLGVDLRTPH
VLLSVPHNRS RERATFWAAG LARAAHGLST AYHDEVLLLL PGDHPGEAAR KAARELGQAL
GTPATVGAAG PIHLPTGAQT AHREARRCAE ALTALGREGD GASSGELGFV GLLLGGGQDV
QPFLTSALGP VIGYDSRRGT ELATTLEAYY AAGKSPSKAA DALHVHANTV AQRLERIGRL
LGEDWQHPDN ELELRLALKL YRLHHDT
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