Gene Snas_5306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5306 
Symbol 
ID8886515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5633914 
End bp5635149 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content66% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003514033 
Protein GI291302755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAC ATCGATTGCT CGTCATGCTC GCCGTCGTCG CGGCCCTGGC CGCCGGAGGC 
ACCGCCGTCG CGGTCGCCGA ACCCTCGACA GGCCCCGCCG CGGGTACCCC GCTCGACGAG
GAGCTGCTGT CCCAACGGCT CGACGCGCTC GCGGAGGTCA CGGATGCGGC GGTTGTCGCC
GAGGTGCGGG ACGGTGACTT CGTGTGGACC GAGGCCCGGG GTGCCCGGCA GGACGGCGGG
GACGAAGCCG CCGAGGTGGG CGATCGGGTG CGGATCGGGA GCCTCACCAA ATCGATGTTG
AGCACTGTGG TGCTTCAGTT GGTTGAGGAG GGGGAGCTGG GGTTGGACGA TGAGGTGGAG
GAGCTGGCGC CGGGGTTGTT GCCGTACGAG GAGACGATCA CGGTGAGGCA GCTGTTGGGG
CACACCGCCG GGGTTCCCGA TTACTTCTTC GACATCTATC CGTCGCTGGC GCAGGGGTCG
GCGGCCGATG TCGAGACCAA CCGGTTGAAC GAGTACCGGC CCGAGGAGAT CGTGGAGACG
GCGACGAAGC GGCCGTTGGA CTTCGTTCCG GGCAGCGATT ACCAGTACTC CAACACTGGG
TACTACGCGC TGGGGTTGCT GGTGGAGCGG CTGACCGGGG ACTCTGTGGA GGATGAGATC
GTCGAGCGGG TTCTCGAACC GGCCGGTATG GACGCTTCGT ATCTGCCCGA GCGGGATCCT
GCGATGGAGG GTGACCATTT GGACGCTTAC TTCGAGGCGG GGTCGAAGCC GGGGGAGAAA
CGCATCGATA CGTCGATGGT GTCGCCGACT CACTACTGGG CGGCGGGGGT GACGGTGTCG
ACCGCCGCCG ACATGAACCG GCTGTACCGG GCCATGTTCG ACGGGACGCT GTTGTCGGCG
GAGTCGCTGG ACGAGGCGCG ACAATTCAGT GAACAGTCCG ACGGGGCGTA CGGTCTGGGC
CTGCACGGGG TCGAGGTCGG GTGCGTTGGT GTCCCGGGTG GTAAGGCGAT GGGGCACACC
GGTGGTGCGC TGGGGCATTC GACGATCTCG TTCCACTCGC CGGAAGCCGA CAAGCAGGTG
TCCTTCACCT ACGCGATGGA TCCGAACCTG TTGCCCGCCG AGGAGACCGA GAAGGTTGTC
GGGGCCATTG AGGATCTGGT GGTGGCGGGG TTGTGCGGCG ATGAGGTGCC CAAGGACGGC
GGCAGCATCG GGTCGATGCC GCCGGGTGTC TTGTGA
 
Protein sequence
MRKHRLLVML AVVAALAAGG TAVAVAEPST GPAAGTPLDE ELLSQRLDAL AEVTDAAVVA 
EVRDGDFVWT EARGARQDGG DEAAEVGDRV RIGSLTKSML STVVLQLVEE GELGLDDEVE
ELAPGLLPYE ETITVRQLLG HTAGVPDYFF DIYPSLAQGS AADVETNRLN EYRPEEIVET
ATKRPLDFVP GSDYQYSNTG YYALGLLVER LTGDSVEDEI VERVLEPAGM DASYLPERDP
AMEGDHLDAY FEAGSKPGEK RIDTSMVSPT HYWAAGVTVS TAADMNRLYR AMFDGTLLSA
ESLDEARQFS EQSDGAYGLG LHGVEVGCVG VPGGKAMGHT GGALGHSTIS FHSPEADKQV
SFTYAMDPNL LPAEETEKVV GAIEDLVVAG LCGDEVPKDG GSIGSMPPGV L