Gene Snas_5260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5260 
Symbol 
ID8886469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5586860 
End bp5587585 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID 
ProductDedA family membrane protein 
Protein accessionYP_003513987 
Protein GI291302709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCT GTGCCGAGTG CCATACCCTT TTGCGGGTGA AGGAGCTTGA GCACGCGATC 
ATGGATTACA TCGATCCATT CATGCAGACG CCGTGGATCT TCGTCCTGGT GTTCGCGATC
GCATTCATTG ACGGATTCTT CCCGGTGGTT CCGGGCGAGA CGACGGTTAT CGCGGCCGGT
GCCGTGGCCG CCTCGACCGG TTACCCGAAC ATCGCGCTGA TCATCGCGGT GGCGGCACTG
GGGGCGTTCG GCGGCGACCA TGTCTCCTAC GCCATCGGGC GGTTCGCCTT CGGGCCGATA
GCCAGGCGAC TCAAACCCGG CACCAAGAAG AAGAAAGCCT TCGACTGGGC CCATGACGCC
TTGGAGAAAC GCGGCGGGAT CGTGCTGATC GTGGCGCGAT ACATCCCCGG CGGCCGCACC
GCCATCACCA TCACCAGCGG CGCGGTGCGT TACAGCCTGC GCAAGTTCTC GTTCTTCGAC
TCGATCGCGG CCGTCTCCTG GGGTGTCTAC TCCGGAATGA TCGGCTTCCT GGCGGGCAAG
ACCTTCGAGG GACGGCCGCT GCTGGCGCTG GGGCTGGGTT TCGCGATCGC GATCGTCTGC
GCCGGGATCA TGGAGCTGGT CCGGTTCCTG CTGGAGAAGC GCGCCAAGGC CCGTGAGGCC
CTGGCGGTCG CGGTACCGGC ACCCCGGGTC GAGGACGCCG CGGCGCCGGT ACCGGTCAAG
GACTAG
 
Protein sequence
MRICAECHTL LRVKELEHAI MDYIDPFMQT PWIFVLVFAI AFIDGFFPVV PGETTVIAAG 
AVAASTGYPN IALIIAVAAL GAFGGDHVSY AIGRFAFGPI ARRLKPGTKK KKAFDWAHDA
LEKRGGIVLI VARYIPGGRT AITITSGAVR YSLRKFSFFD SIAAVSWGVY SGMIGFLAGK
TFEGRPLLAL GLGFAIAIVC AGIMELVRFL LEKRAKAREA LAVAVPAPRV EDAAAPVPVK
D