Gene Snas_5258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5258 
Symbol 
ID8886467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5585350 
End bp5585928 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content71% 
IMG OID 
Productthiamine monophosphate synthase 
Protein accessionYP_003513985 
Protein GI291302707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACA CCTTGCCCCG ACTGCTGATA CTCACCGACG CGAGCGCCTG TCCCCGGCCG 
CTGCCTGAGC AGATCGCATT GGCACTCGAC GCCGGTGCCC GGGCGTTCGT GCTGCGTGAG
AAGGGTTTGC CGCCCGCCCG GCGCCGGGCG TTGGCCCAGC GGTTGGAGCC GCCCCTTACC
GAAGCGGGGG CGAAACTCAT CATCTCGGAT CCAACCTGGA CGGTCGACGC GTGTCACCTG
TCGGCGCTCG CCCGAGCGCC CCGGCCCCGT CCGGATCTGG TCGGCCGCTC GGCCCATACC
GGCCAGTCAG ATGATCCCAA CGCGGATTAT GTGACCTTTT CACCGATATA TCCGACCGCT
TCCAAACCCG GCTACGGTCC CGCGCTGGGA CCCGAGGGCC TGGCCGAGTA CTGCGCGAGC
AGCCGGGTGC CGGTCTACGC GCTGGGCGGC GTCGAGACCG GCGAACGCGC CGCCGAGTGC
CGGGCCGCCG GGGCTCACGG CGTGGCGGTC ATGGGCGCGG TGATGCGCGC CGAGGACCCC
GCGACCGTGG TGCGGGAGCT GCTCGACGGC CTGGACTGA
 
Protein sequence
MIHTLPRLLI LTDASACPRP LPEQIALALD AGARAFVLRE KGLPPARRRA LAQRLEPPLT 
EAGAKLIISD PTWTVDACHL SALARAPRPR PDLVGRSAHT GQSDDPNADY VTFSPIYPTA
SKPGYGPALG PEGLAEYCAS SRVPVYALGG VETGERAAEC RAAGAHGVAV MGAVMRAEDP
ATVVRELLDG LD