Gene Snas_5195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5195 
Symbol 
ID8886403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5517092 
End bp5518060 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513923 
Protein GI291302645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.250706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGG CTTTGGGCTG GATCTTCCTC GGCACGATGG TGATCTCCTA CGGGGTCGCC 
AACTTCCTTC AGGCGGTGGC GACCGGCCGG GAGCAGCGGC ACGAATCCCT CAACCCCCGG
CTGCTGTTGA AGCTGGCGTC GCAGAAGACC TACCTGACCG GCATCGCGTT CCAGATCCTC
GGCTTCCTGC TGGCGATCGC CGCGCGTGCC GACCTGCCGC TGTTCCTGGT GCAGGCGGCG
GTGGCCGCCG GGCTGGGTGT CACGGCCGTG CTCGGTGTGG TGCTGCTGAA GTGGCGGCTG
CCCAAGGCCG AGATCGCGCT CCTCATCGGA CTGAGCCTGG GCATCGTCAT GCTCGTCATC
TCGGCCAAGC CCTCGGCCTC CAAGGACCTC GACCTGGTCG CGATCCTGGC GCTGGCGGGC
AGCTGGGTGC TCATCGCGGT CGCGGGCTGG TTCACCGCCC GCAAGCTGCA CGGCGTCCCC
GGTTCGGTGG CGCTGGGCGC GCTGGCGGGC CTGTCCTTCG GCGCCGCCGC CGTGGCCTCG
CGGCCGCTGG CCAGCGCCGT GGGCGTCACC GGACTGCTGT CCGACCCGCT GCTCTACGTC
ATCATCGTGC AGTCGCTGAC CGGTCAGCTG CTGCTGGCGC TGGCGATGCA GCGCGGCAGC
GCCACCGCCG CGGTGGCCGC GATGGACGCC GCCTTCGCGG TACCGGCGGC GGCGGTGGGA
CTGCTGTTGC TGGGCGACCA GATCCGTCCG AACCTGGAGT GGCTGGCGGC CACCGGATTC
CTCGTCACCC TGGGAACGGT GCTGGCCCTG ACCCGCTACG CGCAGCCGCA GCAGCACACC
GCGGCGATCG CGCGGTGGCG GAGCCGCCCG TCGGAGCTTG AGGCCTCAGT GGACGTTCAC
GCGTCGGATC TGTTCCCGCC CACCGACGAC GGCGCGCCGG ATCCGATGCG CGAACCCAGC
AACCGTTGA
 
Protein sequence
MALALGWIFL GTMVISYGVA NFLQAVATGR EQRHESLNPR LLLKLASQKT YLTGIAFQIL 
GFLLAIAARA DLPLFLVQAA VAAGLGVTAV LGVVLLKWRL PKAEIALLIG LSLGIVMLVI
SAKPSASKDL DLVAILALAG SWVLIAVAGW FTARKLHGVP GSVALGALAG LSFGAAAVAS
RPLASAVGVT GLLSDPLLYV IIVQSLTGQL LLALAMQRGS ATAAVAAMDA AFAVPAAAVG
LLLLGDQIRP NLEWLAATGF LVTLGTVLAL TRYAQPQQHT AAIARWRSRP SELEASVDVH
ASDLFPPTDD GAPDPMREPS NR