Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5175 |
Symbol | |
ID | 8886383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5498656 |
End bp | 5499333 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | YhhN family protein |
Protein accession | YP_003513903 |
Protein GI | 291302625 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.283499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGCGAA ACGCCCCCGC GATCGTCTTC GCGATCCTCG TCGCGGCCAA CCTCATCGGT ACGGCCTTCG ATATCCGCAA CCTGCAACTG GTCTCGAAGC CCTTGCTCAT GCCCGCCCTG ATCTTCTGGC TGTACCGCGG CCACGCCCCC ATGGGCACTC ACCTGTGGAT GCTGTTCGGC CTGTTGTTCG CGATCCCCGC CGACACCTTC CTGCTGTTCG AGGGCAGGAC GGTATTCCTG TTCGGCATGT TCTTCTTCGC CCTCATGCAG CTGTGCTTCA TCGGCGCGTA CTTCTCCGCG ACGAAGGTCT TCGCCCGATG GCGAGCCCTG CCCTGGCCGC CACTCGCCTA CCTGGCGTTC TGGCTCGGCT TCAACGCTCT CATGTGGACG AGCTTCGGCG GCCTGGCCGC ACCCATTGCC GTCTACAGCC TGCTGCTGGC GATCATGGCC GCGGCGGCCT CGACGGTGTC CACCATGGTC GGCATCGGCG GCCTGCTGTT CATGGTCTCC GACCTCATGA TCGGCCTGGG TGTCGTGAAC ATCGACTTCA CCGGCCGCGA GGTCGCGATC ATGGCGACCT ACACCCTGGC CCAGTTCCTC ATCGTCACCG GCATCTCCCA CCGGACGATC CCCCGCCCGC GCAACCCCGC GGCCAAACCC GCCACAGTCA GAGCCTGA
|
Protein sequence | MKRNAPAIVF AILVAANLIG TAFDIRNLQL VSKPLLMPAL IFWLYRGHAP MGTHLWMLFG LLFAIPADTF LLFEGRTVFL FGMFFFALMQ LCFIGAYFSA TKVFARWRAL PWPPLAYLAF WLGFNALMWT SFGGLAAPIA VYSLLLAIMA AAASTVSTMV GIGGLLFMVS DLMIGLGVVN IDFTGREVAI MATYTLAQFL IVTGISHRTI PRPRNPAAKP ATVRA
|
| |