Gene Snas_5175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5175 
Symbol 
ID8886383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5498656 
End bp5499333 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID 
ProductYhhN family protein 
Protein accessionYP_003513903 
Protein GI291302625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.283499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGAA ACGCCCCCGC GATCGTCTTC GCGATCCTCG TCGCGGCCAA CCTCATCGGT 
ACGGCCTTCG ATATCCGCAA CCTGCAACTG GTCTCGAAGC CCTTGCTCAT GCCCGCCCTG
ATCTTCTGGC TGTACCGCGG CCACGCCCCC ATGGGCACTC ACCTGTGGAT GCTGTTCGGC
CTGTTGTTCG CGATCCCCGC CGACACCTTC CTGCTGTTCG AGGGCAGGAC GGTATTCCTG
TTCGGCATGT TCTTCTTCGC CCTCATGCAG CTGTGCTTCA TCGGCGCGTA CTTCTCCGCG
ACGAAGGTCT TCGCCCGATG GCGAGCCCTG CCCTGGCCGC CACTCGCCTA CCTGGCGTTC
TGGCTCGGCT TCAACGCTCT CATGTGGACG AGCTTCGGCG GCCTGGCCGC ACCCATTGCC
GTCTACAGCC TGCTGCTGGC GATCATGGCC GCGGCGGCCT CGACGGTGTC CACCATGGTC
GGCATCGGCG GCCTGCTGTT CATGGTCTCC GACCTCATGA TCGGCCTGGG TGTCGTGAAC
ATCGACTTCA CCGGCCGCGA GGTCGCGATC ATGGCGACCT ACACCCTGGC CCAGTTCCTC
ATCGTCACCG GCATCTCCCA CCGGACGATC CCCCGCCCGC GCAACCCCGC GGCCAAACCC
GCCACAGTCA GAGCCTGA
 
Protein sequence
MKRNAPAIVF AILVAANLIG TAFDIRNLQL VSKPLLMPAL IFWLYRGHAP MGTHLWMLFG 
LLFAIPADTF LLFEGRTVFL FGMFFFALMQ LCFIGAYFSA TKVFARWRAL PWPPLAYLAF
WLGFNALMWT SFGGLAAPIA VYSLLLAIMA AAASTVSTMV GIGGLLFMVS DLMIGLGVVN
IDFTGREVAI MATYTLAQFL IVTGISHRTI PRPRNPAAKP ATVRA