| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5173 |
|---|
| Symbol | |
|---|
| ID | 8886381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5496259 |
|---|
| End bp | 5497719 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_003513901 |
|---|
| Protein GI | 291302623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.174477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCAT TCGTCCGCAA ACCGTGGCTG CTGCCGTTCC TCGCGATGCT GGCCATCGGT
GGCCTCGGCA TGTGGCTGCC CGGCCTGTGG GCCGACGAGC TGGCGACCTG GGGTGCCATC
GAGGAGTCCT GGTCGCAGCT GTGGGCGCTG CTGTCCAACA CCGACGCCGT CAACGGCGGC
TACTACGTCG TGATGAAGCT GTGGGCCACC GTGTTCGGCA CCAGCGAGGT CGCGCTGCGG
CTGCCGAGCC TCGTCGCGAT GGCCATCGCC GCCGGGCTCA CCGCCGCCAT CGGCGCCCGG
CTGTGGACCC CCCGCTGGGG GATCCTCGCG GGGGTGCTGT TCGCGTTGCT GCCCATGACG
AGCCGCTACG CCGCCGAGGC CCGCGGCTAC GCGTTCTCGA TGGCCTTCGC CGTACTGGCC
AGCTACCTGC TGGTCCGGCT GTGCCAGCGC CCGACGACCC CACCCGAGCC CACCGACGAC
CAAGCGCCCC AGCCCCGGCA AGCCCCCGTC TGGCGGCTGT GGCTCTACTA CGGCCTGTCC
ATCGCCGCCG CCAGCGTCTT CCATCTCATG GCCATCCTCG TCCTATGTGG CCACGGCTTG
ATGCTGCTCG CGCTCAACCG CCACCGCTGG CGCGGCTGGC TGCTCGCCGC CACCGCCTCC
GTCGCCGCGC TGGCCCCGCT GGCCCTGCTC GGCGCCACCC AGATCAGCCA GACCTCGTGG
GTGCTGCCGC TGTCATTCCG CGCCCTCGCC CACACCCCCA AGGACCTGTT CGAATCCCGC
TGGACCGCCG CCGCCCTGGC GATCCTCATC GTCATCGCGT TGTGGCGCAG CCGCTCCCGC
CCCACGATCG CCGTCGCCGC CTGGGCCCTG GCCCCCGTCC TCGCGCTCAT GCTGGCCGCG
ACCGTCGTCG ACGTCTGGGT GCCCCGCTAC CTGCTCTTCC TCGTCCCCGC CTGGGCCGTG
CTCGGCGTGC GCGCCGTCGC CGGAATCCGC TGGAAACCCA CCGCCATGGT CATGCTCGCC
GTCGCGTTCG TCTCCGGAGC CGGTGCCCAG TACGACATCC GCCGCTCCAG CGGCCACGCC
CACGACACCC TCGGCGCCGC CGCCCTGATC GAGACCGGCT ACCGCGACGG CGACGGGCTC
GCCGTGGCCC TCAACGAACC CGTCGTCCCC TGGGAGGCCC GCGACCTCGT CGCCCGCTAC
CTGCCACCCC CGCTCCAACC CGACGACACC TTTGCCACCA CCGAACAGCG CACCGACGGC
CAGCTCCTCG CCAGCGAATG CCCCGACCCC GCCCACTGCC TGGGTGACAC CCCCCGCCTC
TGGGTCGTCC GCTACGAGAA CCACACCGAC CCGCTCACCG GCATCGGCGG CGCCAAGGAA
CAGCTGCTGC GCGACGAGTT CACCGTCGAC CAGGTGTGGC CCCTGCGCGG CCTCACGGTC
GCCCTGCTGA TCCGCCGCTG A
|
|---|
| Protein sequence | MSPFVRKPWL LPFLAMLAIG GLGMWLPGLW ADELATWGAI EESWSQLWAL LSNTDAVNGG
YYVVMKLWAT VFGTSEVALR LPSLVAMAIA AGLTAAIGAR LWTPRWGILA GVLFALLPMT
SRYAAEARGY AFSMAFAVLA SYLLVRLCQR PTTPPEPTDD QAPQPRQAPV WRLWLYYGLS
IAAASVFHLM AILVLCGHGL MLLALNRHRW RGWLLAATAS VAALAPLALL GATQISQTSW
VLPLSFRALA HTPKDLFESR WTAAALAILI VIALWRSRSR PTIAVAAWAL APVLALMLAA
TVVDVWVPRY LLFLVPAWAV LGVRAVAGIR WKPTAMVMLA VAFVSGAGAQ YDIRRSSGHA
HDTLGAAALI ETGYRDGDGL AVALNEPVVP WEARDLVARY LPPPLQPDDT FATTEQRTDG
QLLASECPDP AHCLGDTPRL WVVRYENHTD PLTGIGGAKE QLLRDEFTVD QVWPLRGLTV
ALLIRR
|
|---|
| |