Gene Snas_5160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5160 
Symbol 
ID8886368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5484795 
End bp5485187 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513888 
Protein GI291302610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.319587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACG GCGTCGACGG GGACGTACTG TTGCTCGACC TGCCCGCCGC CCCGGCCTTC 
CTGCCGGTGT TGCGCACCGC CACGGCCGGG CTGGCCACCC GGTTGAGTTT CGGCCTGGAC
GCGATCGAGG ATCTGCGGCT GGCCGTCGAC GAGGCCGCCG GACTGATGAT GGCGGCCGTC
GACAATCACG ACGCCTCGGC CATCCTGAAC TGCCGGTTCG ACGTCACCGA GACCGAACTG
CTCATCAGCA TCGGCGCCGC CGGAATCGGG TCGCTGCCAC CCCGGCAGTC CTTCGACTGG
CGGGTTCTGG ACGCGCTGAC GGGTTCGGTG AGCACCGAGT TGCACAACGG TGTCACCACC
GTGCGCTTGG CTCAGCCCCG CCCCCGGGTT TGA
 
Protein sequence
MTHGVDGDVL LLDLPAAPAF LPVLRTATAG LATRLSFGLD AIEDLRLAVD EAAGLMMAAV 
DNHDASAILN CRFDVTETEL LISIGAAGIG SLPPRQSFDW RVLDALTGSV STELHNGVTT
VRLAQPRPRV