Gene Snas_5145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5145 
Symbol 
ID8886353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5470220 
End bp5470567 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content60% 
IMG OID 
Productanti-sigma-factor antagonist 
Protein accessionYP_003513873 
Protein GI291302595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.117847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.839532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGT CGATCAAGAC CGGTCCGACT GCGGACGGCG GTATGGTTCT GACGCTGGAT 
GGTGAGGTGG ACTACGCCAC CGCACCACAG ATCCGGGAAA AGATCTCCCA GGTGCTTCGC
GCCGACGATG TCGCCTACAT CAAGGTGGAT GTCGCCAAGG TCACCGTCCT GGATTCAACC
GGCATCGGAA CCCTCGTTGT CGCATACCGC ATCGCGCGGG ACGTTGACGT ACCCGTCTTC
GTCACCAACC CCACCAAGTT CATCAAACGA TTGTTCGCGG TCGTGGGTGC TCAAGAGCTT
CTTGAGGAGC CCACGGACGC GTTCGCTGCT ACCACCGGCA ACGTCTGA
 
Protein sequence
MTLSIKTGPT ADGGMVLTLD GEVDYATAPQ IREKISQVLR ADDVAYIKVD VAKVTVLDST 
GIGTLVVAYR IARDVDVPVF VTNPTKFIKR LFAVVGAQEL LEEPTDAFAA TTGNV