Gene Snas_5097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5097 
Symbol 
ID8886305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5414859 
End bp5415770 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003513825 
Protein GI291302547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0313452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACC GCAACGCACT GTTCACCATC GGTGAACTCG CCCGCCGCAC CGGACTGGCC 
GTACGCACGA TCCGGTTCTG GTCGGACGAG GGCGTCGTCC CCGAGACGAC CCGCTCGGCC
ACCGGATACC GCTTGTACGA CGCCGAAGCG GTGGCGCGCC TCGACCTGGT CAAGACCCTG
CGCGAGCTGG GCCTCGATCT GGAAAAGGTG CGCGAGGTGC TGCACCGGCA GGCCACTGTG
GCCGATGTCG CGGCGGCGCA CGCGCGGGCC CTGGACGTCG AGATCCGCAC CCTCAAGGTG
CGGCGCGCCG TGCTGCGATC GGTCGCTCAC CGCAACAGTT CGACTGAGGA GATGAGAATC
ATGCACAAGA TGGCGAAACT GTCGGCGGCC GAGCGACAGC AACTGCTCGA CGAGTTCGTG
GAGAAGACCT TCGAGGGCGT GTCCCCGCAG GCCCCGGGCG CGAAGATCGC GCAGGGCATG
CGGACGCTGC CCGCCGAACT GCCCGACGAC CCCAGCCCCG AGCAGGTCGA CGCCTGGGTG
GAGCTGGCCG AACTGGTCAG CGACAAGGAC TTCCAGGCCC GGGTCCGGCA GATGGCCGTC
GCCGGAGACA CCGACGAACC CCAGGCCGGG CCGCCCTACG ACCCGGAGCA ATTCGCCGAG
GCGACCGGCA TCGCGTTGGC CGAGAACGTC GACCCCGCCT CGGCGCGGGG CCGGGAGCTG
CTGGACCGGC TCTTCGACGC CGGGCTGGCG GGAGACGAAC GACGCAAGCT GGCCGACGAC
CTGGAGACGT TCACCGACCG TCGGGTGGAG CGGTACTGGT CGCTGCTGGG CGTCCTGAAT
GGATGGCCGG GTCGGCCGTC GATGGTTCAG GCGATGGAAT GGGTCATCGC GGCGCTGCGC
GCGTCGGCTT AG
 
Protein sequence
MSDRNALFTI GELARRTGLA VRTIRFWSDE GVVPETTRSA TGYRLYDAEA VARLDLVKTL 
RELGLDLEKV REVLHRQATV ADVAAAHARA LDVEIRTLKV RRAVLRSVAH RNSSTEEMRI
MHKMAKLSAA ERQQLLDEFV EKTFEGVSPQ APGAKIAQGM RTLPAELPDD PSPEQVDAWV
ELAELVSDKD FQARVRQMAV AGDTDEPQAG PPYDPEQFAE ATGIALAENV DPASARGREL
LDRLFDAGLA GDERRKLADD LETFTDRRVE RYWSLLGVLN GWPGRPSMVQ AMEWVIAALR
ASA