Gene Snas_5080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5080 
Symbol 
ID8886287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5396994 
End bp5397368 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513809 
Protein GI291302531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.527483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCCG CCGAACTGCG CACGACACTG CTGGAATTCG CGTTGTCGCT GCCCGAGGCC 
TGGCGCGACG CGCCCTGGGG TGAGGAGGAC GTCGTCGTCA AGGTGCGCAA GAAGATCTTC
GCCTTCCTCG GCTCGGACGA GGATCCGTCC TCGGTCACCG TGAAACTGCG CGACGGCCAC
GGGCACGCCA TGTCGCTGCC GGGCGCGAAG CCCACCGGGT ACGGGCTGGG GCGGCACGGC
TGGGTGAGCC TGCCGCTGGC CGAGGTCGCC GAGGACGTCG AGCTGCTGTG CGACTGGGTC
GAGGAGAGCT ACCGGCTGGT GGCGCCCAAG ACACTGGTGG CGCGCCTGGA CGCCGACGCC
GATCCGGCTG TGTGA
 
Protein sequence
MTPAELRTTL LEFALSLPEA WRDAPWGEED VVVKVRKKIF AFLGSDEDPS SVTVKLRDGH 
GHAMSLPGAK PTGYGLGRHG WVSLPLAEVA EDVELLCDWV EESYRLVAPK TLVARLDADA
DPAV