| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5021 |
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| Symbol | |
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| ID | 8886228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 5330131 |
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| End bp | 5332284 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | RTX toxins and related Ca2+-binding protein- like protein |
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| Protein accession | YP_003513751 |
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| Protein GI | 291302473 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.63904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0614603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACAGG ACGAGGGCGA CAGCAGCACG GTGTTCGCGG TCATCCGGGT CGCCGCCCGG
TTGTGGCGGC TGGAGGCGGA TCCCGCCGAC GTGCACGCCG CCGCCAACGG CTGGCGGTCC
CTCGGCGGGG ATGTGGCCGA AGAGGGCGAG AAGCTCAACG GTTCCGCCCA GCGGGTCTAT
GGGGAGTGGG CGGGTGAGGG CCGCACTTCC TATGAGACGC ACCAGAAAGC GCTGTCGCTG
ACCATGGTCG CGGCCGACGG GCACTGCGAG ACCGTGGCCG GGGCGCTGGA TGCCGTCGGG
CACGCGCTGA CCCAGTGCGA CGACAAGTTG CGGACGTCCG TCGAGACGAT CATCAAGGCC
GTTCCGTGCA CTGTGGCCGA TGACATCATC ACGTTCACGC CCAAGGACGC CGAGCAGCAG
GCGAAGGTTC TGGCCGCCAC GGCCGAGGCG AAGACGCTGC GCGCGGAGCT CGACAAGCAA
CTCGCCGAGC ACAGTGCCGG TCTGTCGAGC GCCCTGACCG GCTGGAACGC GCTGTGGAAC
GCCATCCAGC CCCTGAACCA GCCACTGGAT GGTCCCGCCG GGGCGCTGAC GCTTCCCGAC
GGGTCGGTCG TCGTCAACAC CGGTACCGGG AACGACAACG TCAAGGTGAC CACCGACAAG
AAGGGCAACA CCGTCGTGAA GGTCAACGGT GTCGAGTCCA AGTATCCGCC CGAAGTGTCG
GTCATCATCC GCAGTGGACA GGGCGACGAC ACGATCAGGA CCGAGACCAA GGAGAAGACC
GGAAGGGACG GTCAACTCAC GGTCCTCAGT GGCAGCGGCA ACGACAAGCT GGACATGAAG
GGTCAGAAAC AGGAGGCGTA CACCGGAGCC GGAAACGACA CCGTCGACGC GAAGAAGATC
GACTTCGGCG CGATAGCCAC CGCGGGTGGG AACGACATCG TGAACACGAA GGACGGTCGC
AACTTCATGG TCGTGACCGG GGAGGATCGC GACCTGGTCA ACGCGAAGGG CAGCAGCAAC
AACGTCTCGA CCGGTCTGGG CGACGACCGG GTCTTCGGGG GCGACGGCAT GGAACGGGTT
TACACCGGAC CGGCGGAAGC CCAGGGCCCC AACGATCCCA ACGAGCACTG GGACGAGGTG
CACGCCGGGA AAGGCGACGA CACCATCGTC GGGGGCAGCC AGACTCAGGA GATATACGCC
GGGGACGGCA ACGACGTCGT CTACGGGGCC GCGGGCAACG ACTACCTGGA CGGACAGAAG
GGTGACGACA AGCTGTATGG CGGCCAGGGA CTGGACGTCG CGTACGGTCT CGACGGCGCC
GACCTGCTGC ACGGCGGCTC CGAAAAGGAC TTCCTGGAGG GCGGGCAGGG CAACGACATG
GCCACCGGCG GCTCGGGCAA TGACGCTATC TCCGGTGGCG GAGGGGACGA CCGGATGGCG
GGCGACGACG GCGACGACGT GTTCTACGGC GGCAAGGGGC ACGACGTCGT GGCCGGAGGC
GAGGGCGCCA ACACCGCTCA CGTCCAGGCA GAGGACGCCG TGGTCGACGC CCGGTTCAAC
CGGGTCGAGA TCAGTGACAA CAACGACGCC TTCGACATCA AGGGCAGCGA CGACTTCAAG
GACCGGGTGC AGGCCGACCT CGACATGATG GCGGCTTCGC CTACCGGGCA ACAGATGCTC
GACGATATGT CCAAACATGA CAATCCCGAG ATCCGGGACT ACGACGTACG CAACGGAAGG
GCGGTTCCGG GGGACGAGGG CGGCGAGATC CTGTACAACC CGGCACACCG GCTTGGCCCC
GAAAGCACTC CCGCCACTGT GCTTTACCAC GAGATGGCCC ATAGCTATGA CTTCGCGACC
GGCAACTGGG ACGAGGACCG AGTATGGGAC CCCAACCATC CGGACACCGA ATGGGACGAC
GTAACCCCGT ACAACAGGGT CGATGACCCC GCCCAGGTGC CGGTGCGCAA CGGTGAACGC
CAGGCAGTGG GGTTGGAGGT CGACCACGAC AACAATCCGG CGACACCCCC GGTCATCGAC
GACAACCACC GCATCGAGCT GACCGAGAAC GGGCTGCGCC AAGAGTTGGG GCGCGAAACC
CGCCCCAGGT ACGGCTCCAC CGCGCAGCCG ACGAACCTGG ACGCCTGGAG GTGA
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| Protein sequence | MRQDEGDSST VFAVIRVAAR LWRLEADPAD VHAAANGWRS LGGDVAEEGE KLNGSAQRVY
GEWAGEGRTS YETHQKALSL TMVAADGHCE TVAGALDAVG HALTQCDDKL RTSVETIIKA
VPCTVADDII TFTPKDAEQQ AKVLAATAEA KTLRAELDKQ LAEHSAGLSS ALTGWNALWN
AIQPLNQPLD GPAGALTLPD GSVVVNTGTG NDNVKVTTDK KGNTVVKVNG VESKYPPEVS
VIIRSGQGDD TIRTETKEKT GRDGQLTVLS GSGNDKLDMK GQKQEAYTGA GNDTVDAKKI
DFGAIATAGG NDIVNTKDGR NFMVVTGEDR DLVNAKGSSN NVSTGLGDDR VFGGDGMERV
YTGPAEAQGP NDPNEHWDEV HAGKGDDTIV GGSQTQEIYA GDGNDVVYGA AGNDYLDGQK
GDDKLYGGQG LDVAYGLDGA DLLHGGSEKD FLEGGQGNDM ATGGSGNDAI SGGGGDDRMA
GDDGDDVFYG GKGHDVVAGG EGANTAHVQA EDAVVDARFN RVEISDNNDA FDIKGSDDFK
DRVQADLDMM AASPTGQQML DDMSKHDNPE IRDYDVRNGR AVPGDEGGEI LYNPAHRLGP
ESTPATVLYH EMAHSYDFAT GNWDEDRVWD PNHPDTEWDD VTPYNRVDDP AQVPVRNGER
QAVGLEVDHD NNPATPPVID DNHRIELTEN GLRQELGRET RPRYGSTAQP TNLDAWR
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