Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4993 |
Symbol | |
ID | 8886200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5300540 |
End bp | 5301148 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003513723 |
Protein GI | 291302445 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.309228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGTCA GACACGACAC CCAGCAGGCC GTGCGGCCGA AGGGTCGGCC GCGCAGCACC GCCGTCGGGG AGGCGATCAC CGAGGCGACC CTCGACCTGA TCGCCGAGTC CGGCTCCATC GAAACCCTGT CCATCGAGGC GATCGCGACC CGCGCGGGTG TCGGCAAGGC CACCATCTAC CGACGGTGGC CCAACAAGGA GGCGTTGGTC GTCGACGCCG TCGGCACCCT CAAGGGCGCG ATCCCCGAAC TGGACGGCGA CAGCGTCCGC GCCGACCTGA TCGTCCTGGC CAACACGATC CGCCGCAGCA GCGACACCCG TGAGGGCAAG ATACTGCCGT GCCTGATCCT GGAGCTCAAA CGCAACCCGG AACTGGCACG GCAGTACGAC AAGGCGATGA ACTCGCGCCG CGAGGTCACC AAGGACGTGC TGCGCGGCGG GATCGCGCGC GGCGAACTGC GCGCCGACAT CGACATCGAC ACCGTCACCG CGATGTTCAG CGCGCCGCTG TTGATGATGT CGGTGATGGG CAACTACAAC GAGGTCGAAC GCGAGGGCCT GGCTGAACGG GTCGTCGACA CGCTGCTGAA CGGCATCGCG GCGCGATAA
|
Protein sequence | MDVRHDTQQA VRPKGRPRST AVGEAITEAT LDLIAESGSI ETLSIEAIAT RAGVGKATIY RRWPNKEALV VDAVGTLKGA IPELDGDSVR ADLIVLANTI RRSSDTREGK ILPCLILELK RNPELARQYD KAMNSRREVT KDVLRGGIAR GELRADIDID TVTAMFSAPL LMMSVMGNYN EVEREGLAER VVDTLLNGIA AR
|
| |