Gene Snas_4993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4993 
Symbol 
ID8886200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5300540 
End bp5301148 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003513723 
Protein GI291302445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.309228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTCA GACACGACAC CCAGCAGGCC GTGCGGCCGA AGGGTCGGCC GCGCAGCACC 
GCCGTCGGGG AGGCGATCAC CGAGGCGACC CTCGACCTGA TCGCCGAGTC CGGCTCCATC
GAAACCCTGT CCATCGAGGC GATCGCGACC CGCGCGGGTG TCGGCAAGGC CACCATCTAC
CGACGGTGGC CCAACAAGGA GGCGTTGGTC GTCGACGCCG TCGGCACCCT CAAGGGCGCG
ATCCCCGAAC TGGACGGCGA CAGCGTCCGC GCCGACCTGA TCGTCCTGGC CAACACGATC
CGCCGCAGCA GCGACACCCG TGAGGGCAAG ATACTGCCGT GCCTGATCCT GGAGCTCAAA
CGCAACCCGG AACTGGCACG GCAGTACGAC AAGGCGATGA ACTCGCGCCG CGAGGTCACC
AAGGACGTGC TGCGCGGCGG GATCGCGCGC GGCGAACTGC GCGCCGACAT CGACATCGAC
ACCGTCACCG CGATGTTCAG CGCGCCGCTG TTGATGATGT CGGTGATGGG CAACTACAAC
GAGGTCGAAC GCGAGGGCCT GGCTGAACGG GTCGTCGACA CGCTGCTGAA CGGCATCGCG
GCGCGATAA
 
Protein sequence
MDVRHDTQQA VRPKGRPRST AVGEAITEAT LDLIAESGSI ETLSIEAIAT RAGVGKATIY 
RRWPNKEALV VDAVGTLKGA IPELDGDSVR ADLIVLANTI RRSSDTREGK ILPCLILELK
RNPELARQYD KAMNSRREVT KDVLRGGIAR GELRADIDID TVTAMFSAPL LMMSVMGNYN
EVEREGLAER VVDTLLNGIA AR