Gene Snas_4948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4948 
Symbol 
ID8886155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5256454 
End bp5257674 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content71% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003513682 
Protein GI291302404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.910518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT CCGTCGCCAA ACCGCTGGGA TTGACCGGGC GCGACTTCAT CCTGATGATG 
GTCGCGAGCC TGGGTGCCTT CACGAACGTG ATGGCGCTGT TGTCCGTCGT TCCCCTGTGG
TCGGCCGATG CCGGGACCAG CGCCAGTGGG GTCGGGGCGA TCACGGCCAC GATGATGGGC
GCCACCGTGG CGTTGCAGTT GGGGATGGGC GGGTTGTTGC GGCGGTTCGC GTTGCGGCAC
CTGTTCGCGG TGGGAGCGTT GCTGTTGGGG GTGCCGACGT TCGGGTATCT GTTGTCGACG
GACCTGGCGT GGGTGTTGGC CGTCTCGGCA GTGCGGGGGT TCGGGTTCGG GATGGTGACC
GTGGCCGGGA GCGCGCTGGC CGCGGAGTTG GTGCCCGCCG TGCAGCGGGG GCGGGCCATC
GCCGCCTACG GGGTGGCCAT CGGGGTGAGC CAGTTCGGGA GTCTGCCGTT GGCCGTGTCG
ATGGCCGAGC GGATCGGGTA CGACACGGTG TTCGTGTTCA CCGCGGTGGC GGCGATCCTG
GCGGCTCCGG CGATGTGGGC GCAGTCGGGG AAGCGGGTCG ACGACATCAC GCCGGTCGAT
GAAGCGTCCG GGGATGGTGT GCGGCAACGG TTGTGGGCGA TGTCGGGGCC CTTCACGGTG
ATGACGGCGG TCGCCTGTGC GCTGGGGGGC ATGTTCACGT TCATCCCGTT GGCGCTGACC
TCGCCGGACG CGGCGGCGGT GGCGCTGTTG ACCATGGCGG CGGGGCTGGT CGGGGCTCGG
TGGGTGTCGG GGATGGTGTC GGACCGGTTG GGGCCGGGGC GGATGCTGTT GCCCTCGGCG
GCGGTCGCGG CGGTGGGTAT GGGTGTCACG GCCGTGGCGA TCTTCTACGG GTTCGACGGA
CTGGCCATTG TGGGTGCCAC CGTGTACGGG GCCGGGTTCG GCGGCTTGCA GAACGACACG
CTGGTGGTGA TGTTCCGGCG CTCGGGGCCG GGTGGGCACG GGCTGGCCAG CATCGTGTGG
AACATCGCCT ACGACGGCGG CACCGGCGTG GGCGGGCTGC TGATCGGGTT GCTGGTGGCC
GGACTGAGCC TGTCCTCGGC CTTCGGGGTG GTGGCGATCG CGATCCTGGC GCTGTGCCCG
CTGGCCTGGC GGGACTGGCG GGCCGAGCAC CGGGCCGCTC ACGCGAAGGT CCCGACCGCC
GCTTGCGCGG GGCCGGGATA G
 
Protein sequence
MSASVAKPLG LTGRDFILMM VASLGAFTNV MALLSVVPLW SADAGTSASG VGAITATMMG 
ATVALQLGMG GLLRRFALRH LFAVGALLLG VPTFGYLLST DLAWVLAVSA VRGFGFGMVT
VAGSALAAEL VPAVQRGRAI AAYGVAIGVS QFGSLPLAVS MAERIGYDTV FVFTAVAAIL
AAPAMWAQSG KRVDDITPVD EASGDGVRQR LWAMSGPFTV MTAVACALGG MFTFIPLALT
SPDAAAVALL TMAAGLVGAR WVSGMVSDRL GPGRMLLPSA AVAAVGMGVT AVAIFYGFDG
LAIVGATVYG AGFGGLQNDT LVVMFRRSGP GGHGLASIVW NIAYDGGTGV GGLLIGLLVA
GLSLSSAFGV VAIAILALCP LAWRDWRAEH RAAHAKVPTA ACAGPG