Gene Snas_4940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4940 
Symbol 
ID8886147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5250002 
End bp5250913 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513674 
Protein GI291302396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.361149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCG AACTGCGCGA TATCGCCATC ACCGCCCTGG CTCCCGTCAT GTGGGGCACC 
ACCTACATCG TCACGACCGA ACTGCTGCCG CCCGGCCGTC CGCTGCTGAC CGCGCTGTTG
CGCGCCCTGC CCGCCGGGCT GCTGTTGGTC GTGTTGGCCC GCAAGCTTCC CCAGGGCTCG
TGGTGGTGGA AGGCCAGCGT CATCGGGGCC CTGAACATCG CGGCCTTCTT CGCGTTGCTG
TTCATCGCCG CCTACCGGCT GCCCGGCGGC GTCGCCGCCG TGGTCTCGGC CATCGGTCCA
CTGGTGACCG CGGGCATGAC GATCCTGATC CTCAACCAGA AGGTGCGGCT GCGGACCTGG
CTGCTGGGCA TCGCCGGGGT CGCCGGAGTC GCGATGGTCA TGCTCAACGC CGCCGCGAAA
CTCGACGCGC TGGGCATGAT CGCCGGACTG GCCGCCGCCA CGTCCATGGC CGTGGCGACC
ACCCTCACCA AACGCTGGGG CGCCCCGACC GGTGCCGGTT CGGCGGCGCT GGCGGGCTGG
CAGCTGACGG CCGGTGGCCT GTTCCTGCTG CCGTTCGCGT TGATCATCGA GGGCGGCATT
CCGGCGCTGA GCCTGACCAA CGTCGCCGGA TACGTCTACC TCGGCCTGGT CAACACCGCG
CTGGGCTACT GGCTGTGGTT CCGGGGCATC TCGCGACTGT CGGTGGCGCC GTTGAGCTTC
CTGGGTCTGC TGTCGCCGCT GACCGCCGCG ACCGTCGGCT GGATCGTCCT GGGCGAGGCG
CTGACCCCGC TGCAACTGCT GGGCATGGTC GTCGCCTTCG GCGCCACCGT CGCCGGACAG
CTCACCTCGG TGAGGCGGCC CGCCGTCGTC CCGCAGGCCA CGCCGCGAGC CGAACTGGCG
AAGGCGTCCT AG
 
Protein sequence
MNRELRDIAI TALAPVMWGT TYIVTTELLP PGRPLLTALL RALPAGLLLV VLARKLPQGS 
WWWKASVIGA LNIAAFFALL FIAAYRLPGG VAAVVSAIGP LVTAGMTILI LNQKVRLRTW
LLGIAGVAGV AMVMLNAAAK LDALGMIAGL AAATSMAVAT TLTKRWGAPT GAGSAALAGW
QLTAGGLFLL PFALIIEGGI PALSLTNVAG YVYLGLVNTA LGYWLWFRGI SRLSVAPLSF
LGLLSPLTAA TVGWIVLGEA LTPLQLLGMV VAFGATVAGQ LTSVRRPAVV PQATPRAELA
KAS