Gene Snas_4874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4874 
Symbol 
ID8886081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5174213 
End bp5175451 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content73% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003513608 
Protein GI291302330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0996184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.48067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGCC AACTGGCCGG ACTGGTCGCC GCGACCACGT CGCTGGTGCT GGTGGCGTTG 
CTGATCCCCG TCGGCCTGCT GCTGCGCTCG CAGGCCGAGC AACGCGCGAT CGCCGAGGCC
ACACTGCGAG CCCAGTCGGT GGCGCAACTG GTGCCGCAGT TGAGTTCCGA CTCCGAGGCC
CTCGGCGAGG GCGTGACGGT GTTCCTGCCC GACGGCACCG AGCTCGGCGA CCCCGCGCCC
CGCGGCGACT CGGTGAAACT CGCCCAGACC GGCCGCGCCT TCACCGCCTC CACACCCGAC
GGTGTGGAGG TGCTGGTACC CACCAGATCC AGCGACAGCG GCACCGCCGT GGTGCGGGTC
TTCGTCGGCC AGGACCGGCT GCACCAGGGC GTGACACAGT CGATCGCTGT GCTGTCCGCC
ATCGTGCTGG TCCTGTTGGG ACTCGGCATC CTGCTGGCCA ACCGGCTCGC CCGCCGCATG
GTCTCCTCGG TCGACGAACT CGCGGGCACC GCCGACCGGC TCGCCACCGG CGACCTGACC
GCCCGCGCCG CGTTGGACGG CCCACCGGAA CTGCGCCGCG TCGCCGAGGA ACTCAACCGC
CTCGCGGCCC GCATCGGGGA ACTGCTGACC TCCGAACGCG AAGAGGTCGC CGACCTGGCC
CACCGCCTGC GCACCCCGTT GACCGCGTTG CGGATGAACA TCGACAACCT CGGCGACACC
GCATCCGCCG CACCGCTGCG GTCCTCGGTG GACACCCTCG CCGGACACGT CGACGAACTG
ATCCGCACCG CCCGCCGACC GGTCCGCGAG GGCGCCGCCC CGGTCGCCGA CCTGGCCGCG
GTGGCGGCCG ACCGGCTCCG CTTCTGGGGC GCCCTGGCCG AGGACGACGA CCGCGAACTC
TCCGGTGACA TCCCCGCCTT CCCCGTCACG GTTCGCACCA ACACCGACGA CCTCACCGCG
GCCCTGGACG CCTTGCTGGA CAACGCGTTC CGCCACACCC CCGCCGGTTC GGCACTGCGG
ATCGCGGTCT CCCCGTCGGG CACGGTCACG ATCGACGACG CCGGTCCCGG CTTCCGCAAC
CGCGCACTGG CCAACCGAGG CCACTCCGGC GCCGGTTCGA CCGGCCTGGG GCTCGACATA
GCCCGCCGCA CCGCCGCCGC CTCCGGCGGC GACCTCCACA TCGGAACATC CCCGTGGGGC
GGTGCCCGCG TCGAACTGCG CTTCGGGCCG TCACGGTGA
 
Protein sequence
MRRQLAGLVA ATTSLVLVAL LIPVGLLLRS QAEQRAIAEA TLRAQSVAQL VPQLSSDSEA 
LGEGVTVFLP DGTELGDPAP RGDSVKLAQT GRAFTASTPD GVEVLVPTRS SDSGTAVVRV
FVGQDRLHQG VTQSIAVLSA IVLVLLGLGI LLANRLARRM VSSVDELAGT ADRLATGDLT
ARAALDGPPE LRRVAEELNR LAARIGELLT SEREEVADLA HRLRTPLTAL RMNIDNLGDT
ASAAPLRSSV DTLAGHVDEL IRTARRPVRE GAAPVADLAA VAADRLRFWG ALAEDDDREL
SGDIPAFPVT VRTNTDDLTA ALDALLDNAF RHTPAGSALR IAVSPSGTVT IDDAGPGFRN
RALANRGHSG AGSTGLGLDI ARRTAAASGG DLHIGTSPWG GARVELRFGP SR