Gene Snas_4825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4825 
Symbol 
ID8886032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5122954 
End bp5123697 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID 
ProductSNARE associated Golgi protein-like protein 
Protein accessionYP_003513559 
Protein GI291302281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAT CTCCGGTTCG CAGACGCGTC CGGCGATTCG CGTACCTGGT CGTGGGCGTC 
GCCGCGCTGG CGGCGCTCAC GCTCGCGTTC GGGCCCAAGG ACCCGGCCGC CGCGAAGGAT
CTGGTGAACC AGGCCGGGAT CATCGCGCCC GTGGTCGCCG TCGTCGGGAC CGCGCTGGGC
ATCGTGGTGA TGATCCCCCG CACCTTCATG TCCATCGCCT CGGGAATGCT GTTCGGCTGG
CTGGCCGGAT TCGTCTACGT CATCCTGGGC ACCATGCTCG GCGCCGGTAT CGGTTTCGCG
CTCGGACGGC TGCTGGGCCG CGAGTTCGTG GCCGAGAAGC TGCGCCGCTG GTCGACCGTG
GAACCGGGCG AGGCACCCGG CGCCCGCGTC AAGGCGGTGC GCTGGGTCGA GCGTGGCATC
GCCAGGACCG ACGGCCTGCT GGAACGGCAC GGCGTCCTGG GCATCTGGAT CGCACGCGTC
ATCCCGTTGT CCCACTTCGG TTTCCTGTCC TACGCCTGCG GCACCGCCTC GGTGCGGCTG
GCCCCGTACC TGCTGGGGAC GCTCATCGGC GCCATCCCCG GGTCGCTGGG CTACACCGCC
GTCGGCGGCG CCGCCTTCAG CGCCGGGGGA CTGTCGCTCG CCCTGGGCCT GGCCGTGGGA
ATGAACGTGT TCAGCCTCGC GGTTGTGGCA TTGGTGCGAC GGTTCTTCGG ACGCCGTGGC
ACCGTAGAGG CCGAAACCGG ATGA
 
Protein sequence
MKPSPVRRRV RRFAYLVVGV AALAALTLAF GPKDPAAAKD LVNQAGIIAP VVAVVGTALG 
IVVMIPRTFM SIASGMLFGW LAGFVYVILG TMLGAGIGFA LGRLLGREFV AEKLRRWSTV
EPGEAPGARV KAVRWVERGI ARTDGLLERH GVLGIWIARV IPLSHFGFLS YACGTASVRL
APYLLGTLIG AIPGSLGYTA VGGAAFSAGG LSLALGLAVG MNVFSLAVVA LVRRFFGRRG
TVEAETG