Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4763 |
Symbol | |
ID | 8885969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5061649 |
End bp | 5062407 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003513498 |
Protein GI | 291302220 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000323039 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000700922 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGAACCAA CACCCGCGGC GATCCGCGCG GCCCAACGCG GCACCACCAA ACGCACCCCC CGCGTCGAGC TGTCCCTGGA CCGCATCGTC ACCGCCGCCA TCCACCTGGC CGACCGCGAC GGCCTGCCCG GCATCTCGAT GGCCAAGGTC GCCAAGGAAC TCGGCTTCGC CACCATGTCC CTCTACCGCC ATCTGGACTC CAAAGAGGAA CTGCTCCTCC ACGCCCAAGA CTCAGCGATC GGCCCACCCC CGGCCAACAT CGCCACCGCC CCCGACTGGC GCACCTGCCT CACCCGCTGG ACCCGCGAAC TGGTCACCGC CTACCGCCGC CACCCCTGGG CCGCCGAAAT CCCCGTCACC GGCCCACCCC TCCTCCCCCG CAGCCTCGAA TGGCTCAACG CGGGCCTCAC CACCCTCCGC ACCCTCCCCC TCCAACCCCT CGAAAAACTC TCCACAATGT CCCTCCTCGG CGGCTACGCC CGCACCGAAG TAACCCTGCG CGCCATCATC GACAAAGAAG CCGCCCTCGA CCCCAACGCC CGCCCCGACC TCGAATACGA ATCCCAACTC CGCACCCTCA CGGCCCACCG CGACCTCCCC GCCCTCACCG AAATGCTCGC CACGGGTGAC ATCTTCACCC TCCCCAGCGA CACCCCCACC GACGACGGCG ACGACTTCAT GGTCGACTTC GGCCTCGAAC GCATCCTCGA CGGCATCCAA GCCCTGATAA CGCGTCGCGA AGGCTCCCGG AGAAAATAA
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Protein sequence | MEPTPAAIRA AQRGTTKRTP RVELSLDRIV TAAIHLADRD GLPGISMAKV AKELGFATMS LYRHLDSKEE LLLHAQDSAI GPPPANIATA PDWRTCLTRW TRELVTAYRR HPWAAEIPVT GPPLLPRSLE WLNAGLTTLR TLPLQPLEKL STMSLLGGYA RTEVTLRAII DKEAALDPNA RPDLEYESQL RTLTAHRDLP ALTEMLATGD IFTLPSDTPT DDGDDFMVDF GLERILDGIQ ALITRREGSR RK
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