Gene Snas_4761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4761 
Symbol 
ID8885967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5059881 
End bp5060666 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003513496 
Protein GI291302218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000109025 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000621886 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCA CGACCCTGCC CGGAACCGGA TACCGACCGT TCGCCGACGC GGCGGTGATG 
ACCGGCCGCA GCCTGCGCCA CGCCGTGCGC AATGTCGACA GTCTCCTCAT CGGGGCGTTC
CTGCCGGTGA TGGTGCTGCT GCTCATGACG ACGGTGTTCG GCGGCGCGAT CGAATCCGAG
GGCTTCGACT ACGTCGACTA TGTCGTCCCC GGCGTGCTGC TGATGTGTGT CGGCTATGGA
GCGTCGATGA CGGCCACCAG CGTCACCAGC GACATGAAGC AGGGCGTCAT CTCGCGGTTC
AGGACGATGA ACGTGCTGCC CGCCGCCGTG GTCGTCGGGC ACGTCCTCGC CGCCGTGCTG
CGCAACCTCG TGTCGGTGGC GATGGTCATC GTCACCGCGC TGCTCATCGG CTTCGACCCG
CGTGCCAGCG CGACCGACTG GCTGGCCGTC GCGGGCGTGA TGGCATTCTT CGTCCTGGCG
GTGGCGACGC TGTCGTCCAT GTACGGTCTG GTCGCCAAAT CCGTTGAGGG AGCGGCGGTT
CCGGGGTTCT TCTTCCTGTT CCTGCCCTAC GTGTCCAGCA CGTTCGTGCC GATCCACACG
CTGCCGGAAT GGTTGCGGCC CATCGCCGAG TACCAGCCGT TCACGCCGAT CGGGGAGACG
CTGCGCAGCC TGCTCATGGG CACGCCGCTG GGCGACTACG GCTGGCAGGC GATCGCGTGG
TGCGCCGGAC TGCTGGTCCT GGGCGTGATC GGCACGGCGG TACGGTGGCG CCGGATCCGG
CACTGA
 
Protein sequence
MSTTTLPGTG YRPFADAAVM TGRSLRHAVR NVDSLLIGAF LPVMVLLLMT TVFGGAIESE 
GFDYVDYVVP GVLLMCVGYG ASMTATSVTS DMKQGVISRF RTMNVLPAAV VVGHVLAAVL
RNLVSVAMVI VTALLIGFDP RASATDWLAV AGVMAFFVLA VATLSSMYGL VAKSVEGAAV
PGFFFLFLPY VSSTFVPIHT LPEWLRPIAE YQPFTPIGET LRSLLMGTPL GDYGWQAIAW
CAGLLVLGVI GTAVRWRRIR H