Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4761 |
Symbol | |
ID | 8885967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5059881 |
End bp | 5060666 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC-2 type transporter |
Protein accession | YP_003513496 |
Protein GI | 291302218 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000109025 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000621886 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACCA CGACCCTGCC CGGAACCGGA TACCGACCGT TCGCCGACGC GGCGGTGATG ACCGGCCGCA GCCTGCGCCA CGCCGTGCGC AATGTCGACA GTCTCCTCAT CGGGGCGTTC CTGCCGGTGA TGGTGCTGCT GCTCATGACG ACGGTGTTCG GCGGCGCGAT CGAATCCGAG GGCTTCGACT ACGTCGACTA TGTCGTCCCC GGCGTGCTGC TGATGTGTGT CGGCTATGGA GCGTCGATGA CGGCCACCAG CGTCACCAGC GACATGAAGC AGGGCGTCAT CTCGCGGTTC AGGACGATGA ACGTGCTGCC CGCCGCCGTG GTCGTCGGGC ACGTCCTCGC CGCCGTGCTG CGCAACCTCG TGTCGGTGGC GATGGTCATC GTCACCGCGC TGCTCATCGG CTTCGACCCG CGTGCCAGCG CGACCGACTG GCTGGCCGTC GCGGGCGTGA TGGCATTCTT CGTCCTGGCG GTGGCGACGC TGTCGTCCAT GTACGGTCTG GTCGCCAAAT CCGTTGAGGG AGCGGCGGTT CCGGGGTTCT TCTTCCTGTT CCTGCCCTAC GTGTCCAGCA CGTTCGTGCC GATCCACACG CTGCCGGAAT GGTTGCGGCC CATCGCCGAG TACCAGCCGT TCACGCCGAT CGGGGAGACG CTGCGCAGCC TGCTCATGGG CACGCCGCTG GGCGACTACG GCTGGCAGGC GATCGCGTGG TGCGCCGGAC TGCTGGTCCT GGGCGTGATC GGCACGGCGG TACGGTGGCG CCGGATCCGG CACTGA
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Protein sequence | MSTTTLPGTG YRPFADAAVM TGRSLRHAVR NVDSLLIGAF LPVMVLLLMT TVFGGAIESE GFDYVDYVVP GVLLMCVGYG ASMTATSVTS DMKQGVISRF RTMNVLPAAV VVGHVLAAVL RNLVSVAMVI VTALLIGFDP RASATDWLAV AGVMAFFVLA VATLSSMYGL VAKSVEGAAV PGFFFLFLPY VSSTFVPIHT LPEWLRPIAE YQPFTPIGET LRSLLMGTPL GDYGWQAIAW CAGLLVLGVI GTAVRWRRIR H
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