Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4755 |
Symbol | |
ID | 8885961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5055486 |
End bp | 5056076 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_003513490 |
Protein GI | 291302212 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.208471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00173659 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGGAC GCAGAACCGG ACCGGACCTG GTGGCGCTCA CCGTCCTGGC CATCCTCAGC CGAGGCCCCC GGCACGCGTA CGACCTGCAC CGCTTCATCG TCGACACCCA CAAGGACTAC GTGACCGGCC TACCCCGCAG CCTCTACCAC GCGGTCGCCC GACTCGCCGA CGACGGCCAC ATCGCCCCCG TCGAGACCAG CCGCGCCGGA CGCCGTCCCG AGCGCACCGT CTACGAACTG ACCGCGACCG GCGAAACCGA ACTGACGCAT CGCCTCCAAA CGCTGCTGAC CACGATCGGC CGCGACACCA CCGGCTTCGT CGCCGCGCTG TCGCTCATGG GCGGCCTGCC CCGCGAGACC GCCGCATCAG CACTTCGCGA GCGGGCCGCG GCACTGCGCA CCCGCGTCGA AGGCGCGAAA CAAACGCTCG CGGACCTCAC CGAACACGGC GTTCCGCGAC TGCCGTTGCT GGAGCTCGAA TACGAGCACT CCCGTTACGC GTCCGAACTG GACTGGGTCG AGCGGATCCT CGCCGACCTC CACAACGGAA CCATCGACTG GGAGGTGCCA CTGCCACCGA CGACCGCATG A
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Protein sequence | MAGRRTGPDL VALTVLAILS RGPRHAYDLH RFIVDTHKDY VTGLPRSLYH AVARLADDGH IAPVETSRAG RRPERTVYEL TATGETELTH RLQTLLTTIG RDTTGFVAAL SLMGGLPRET AASALRERAA ALRTRVEGAK QTLADLTEHG VPRLPLLELE YEHSRYASEL DWVERILADL HNGTIDWEVP LPPTTA
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