Gene Snas_4740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4740 
Symbol 
ID8885946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5042272 
End bp5042862 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003513475 
Protein GI291302197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.609223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.406356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAAT CCGCCAAGTC GCGCCGCCGG GGCGCCGAGC TGGTCAACGC CATCCACGAG 
GCCGCCATCG ACGAGCTCAA CGAGGTCGGC ATCGGACGGT TGACGATGGA GGGAATCGCC
CGACGCAGCG GCGCCGCCAA GACCTCGCTG TACCGGCGCT GGCCCGACAC GCACGCGCTG
CTGATCGAGG CGCTGCGCGA GCGGATGCCG CAGGAGACCC CCAGCCCCGG CGCCGACGAT
CTGCGCGGCG ACCTGATCGC GGCGCTGCAA CTGTTGTGCG ACTGGATGAT GACCCCCGCC
GCCCGTGCGG TCTCGGCCAT CGTGGCCGGA AGCGGGGCCC ACCCCGAGTT CACCAAGCGG
GTGTTCGAGG AGGTCTTCGA GGCGAAGGGT TCCCGCTTCA CGCTCACCGT GTTGCGCCAC
TACGCCGATC GCGGTGAGAT CGACCCGGAG CGGGTGACCC CGGTCGTGGC CGACATCGGG
GAGGCGTTGG TGTTCAAGTT CTCCATGGAC CGGTTCGCGA TGCCCGCCGA GTCCGATCTG
GCCGCGATCG TGGACGAGGC GATCCTGCCC GCGCTCGGGC TCGGGCGCTA G
 
Protein sequence
MSESAKSRRR GAELVNAIHE AAIDELNEVG IGRLTMEGIA RRSGAAKTSL YRRWPDTHAL 
LIEALRERMP QETPSPGADD LRGDLIAALQ LLCDWMMTPA ARAVSAIVAG SGAHPEFTKR
VFEEVFEAKG SRFTLTVLRH YADRGEIDPE RVTPVVADIG EALVFKFSMD RFAMPAESDL
AAIVDEAILP ALGLGR