Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4740 |
Symbol | |
ID | 8885946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5042272 |
End bp | 5042862 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003513475 |
Protein GI | 291302197 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.609223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.406356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGAAT CCGCCAAGTC GCGCCGCCGG GGCGCCGAGC TGGTCAACGC CATCCACGAG GCCGCCATCG ACGAGCTCAA CGAGGTCGGC ATCGGACGGT TGACGATGGA GGGAATCGCC CGACGCAGCG GCGCCGCCAA GACCTCGCTG TACCGGCGCT GGCCCGACAC GCACGCGCTG CTGATCGAGG CGCTGCGCGA GCGGATGCCG CAGGAGACCC CCAGCCCCGG CGCCGACGAT CTGCGCGGCG ACCTGATCGC GGCGCTGCAA CTGTTGTGCG ACTGGATGAT GACCCCCGCC GCCCGTGCGG TCTCGGCCAT CGTGGCCGGA AGCGGGGCCC ACCCCGAGTT CACCAAGCGG GTGTTCGAGG AGGTCTTCGA GGCGAAGGGT TCCCGCTTCA CGCTCACCGT GTTGCGCCAC TACGCCGATC GCGGTGAGAT CGACCCGGAG CGGGTGACCC CGGTCGTGGC CGACATCGGG GAGGCGTTGG TGTTCAAGTT CTCCATGGAC CGGTTCGCGA TGCCCGCCGA GTCCGATCTG GCCGCGATCG TGGACGAGGC GATCCTGCCC GCGCTCGGGC TCGGGCGCTA G
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Protein sequence | MSESAKSRRR GAELVNAIHE AAIDELNEVG IGRLTMEGIA RRSGAAKTSL YRRWPDTHAL LIEALRERMP QETPSPGADD LRGDLIAALQ LLCDWMMTPA ARAVSAIVAG SGAHPEFTKR VFEEVFEAKG SRFTLTVLRH YADRGEIDPE RVTPVVADIG EALVFKFSMD RFAMPAESDL AAIVDEAILP ALGLGR
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