| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4692 |
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| Symbol | |
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| ID | 8885898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 5000676 |
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| End bp | 5002418 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003513428 |
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| Protein GI | 291302150 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.375992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.284886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAGA CAGCGTCCAC CAGCCCCGAC ACCGCTGCGC GATGGTGGCG AAACGCGGTG
ATCTACCAGA TCTATCCGCG CAGCTTCGCC GACGGCGACG GCGACGGAAC CGGTGACCTG
GCGGGAATCC GGTCCCGGCT TCCCTACCTT GTGGACCTGG GTGTCGACGC GATCTGGTTC
ACCCCCTGGT ACGTCTCGCC GCTGGCCGAC GGGGGTTACG ACGTCGCCGA CTACCGGCGG
ATCGACCCGG CCTTCGGCAG TCTCGCCGAC GCCGAGGCGC TGATCGCCGA GGCGGCCGCG
CTGGGCCTGC GCACCATCGT CGACGTCGTC CCCAACCACG GCTCCGACCA GCACCCGTGG
TTTCGCGAGG CGCTGCTGTC ACCGCCGGGT TCGCCGCAGC GGCAACGGTT CTGGTTCGCC
GACGGCAAGG GCGACAACGG TGAGCTGCCG CCGACGAACT GGGTGTCCAG TTTCGACGGC
GGCACCTGGA CCCGGGTGAA GAACCCGGAC GGCGAGCTGG GGCAGTGGTA CCTGCACCTG
TTCGCCCCCG AGCAGCCCGA CTGGAACTGG AACCACCCCG ACGTCGTCGC CGAACACGAG
GACGTGCTGC GGTTCTGGTT CGAGCGCGGT GTCGCCGGGA TCCGCATCGA CTCGGCGGCG
CTGCCGGTCA AGGATCCGGA CCTGCCGGAG GTGACCAGCC AGGTCGGCGG CGAGCACCCG
TATCTGGACC GCGACGAGCT GCACGACATC TACCGGGGCT GGCGCCGGGT CGCCGACTCC
TTCGGCGCCG ACCGGATGCT GGTGGGCGAG GTGTGGCTGG CCGACCCGAA GCGGTTCGCG
CTGTACCTGC GTCCCGACGA GATGCACACG GCGTTCAACT TCGACTTCAT GGCGCGGCCG
TGGCGGGCGG GCGAGCTGCG CGAGTCCATC CAGTCCACCC TGGATTCGCA TCGGGAGGTC
AAGGCACCGC CGACCTGGGT GCTGTCCAAC CACGACGTCA CCCGCCCGGT GACCCGGTTC
GGGCGCGCGG ACTCCGGCTT CAGTTTCGCG GCCAAGACCT TCGGGGTGGC CACCGACCTG
GAACTGGGGC GCCGACGCGC CCGGGCGGCG GCGCTGTTGA GCGCGGCACT GCCGGGTTCG
CTGTACATCT ACCAGGGCGA CGAGCTGGGG CTGCCCGAAG TGGAGGACCT GCCCGCCGAG
GCCATCAGCG ACCCGATGCA CTTTCGTTCC GGCGGCCGCG ATCCCGGCCG CGACGGCTGC
CGGGTTCCGT TGCCATGGAC CCGCACGGGG CCGTCGCTGG GGTTCGGCGA CGGCGAGGAC
CCGGCCGCCC CGTGGCTGCC GCAACCCTCC GATTGGGGGG AGCTGTCGGT GGCGGCCCAG
CGCGAGGATC CCGACTCGAT GCTGCGGCTG TACCGCGAGC TGTTGGCGAT CCGGCGCCGG
GAACCCGGCC TGCGCGGCGA GGACTTCGCC TGGCTGGACC TCGATGCCGA GATGGCCGGG
CTCGGCGAGG GCCGGAACTC GTCCGCCCAG GTGGCCGGGC GCGACCGGGA TCGCGCGCTC
GGTGCCGAGG TGATCGCGTT TCGGCGCGGC ATCGACCTCG CCTGCGTCGT CAACCTCGGC
GACTCCCCCG TGAAGCTTCC CCCGCACACG TCAGTACTGC TTGCCAGCGA CGACATCACC
GGCGACCGGC TGCCCGCCGA TACCGCCGCC TGGCTGCGTG TGCCCACCCC CAAACAAATT
TAG
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| Protein sequence | MSETASTSPD TAARWWRNAV IYQIYPRSFA DGDGDGTGDL AGIRSRLPYL VDLGVDAIWF
TPWYVSPLAD GGYDVADYRR IDPAFGSLAD AEALIAEAAA LGLRTIVDVV PNHGSDQHPW
FREALLSPPG SPQRQRFWFA DGKGDNGELP PTNWVSSFDG GTWTRVKNPD GELGQWYLHL
FAPEQPDWNW NHPDVVAEHE DVLRFWFERG VAGIRIDSAA LPVKDPDLPE VTSQVGGEHP
YLDRDELHDI YRGWRRVADS FGADRMLVGE VWLADPKRFA LYLRPDEMHT AFNFDFMARP
WRAGELRESI QSTLDSHREV KAPPTWVLSN HDVTRPVTRF GRADSGFSFA AKTFGVATDL
ELGRRRARAA ALLSAALPGS LYIYQGDELG LPEVEDLPAE AISDPMHFRS GGRDPGRDGC
RVPLPWTRTG PSLGFGDGED PAAPWLPQPS DWGELSVAAQ REDPDSMLRL YRELLAIRRR
EPGLRGEDFA WLDLDAEMAG LGEGRNSSAQ VAGRDRDRAL GAEVIAFRRG IDLACVVNLG
DSPVKLPPHT SVLLASDDIT GDRLPADTAA WLRVPTPKQI
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